NONHSAT006958
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006958 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1040 nt |
Genomic location |
chr1+:157895764..157918861 |
Exon number |
4 |
Exons |
157895764..157895834,157899321..157899581,157915446..157915551,157918259..157918861 |
Genome context |
|
Sequence |
000001 GAACTACTCC TGTGAGGCCG ACAATGGCTG GGGATCCCAG CGCAGTGAGG TGGTGGCACT CACGGTCACA GAGCCCCCGA 000080
000081 CCAAAGTCCG TTTGATTAAT GGTCCTCACC ACTGCAAAGG AAGAGTGGAA GTGGAACAGG AAGGTCACTG AGGTACCGTG 000160 000161 TGTGATGACA GCTGGGACAT GAAGGATGTG GCCGTGGTGT GCCAGGAGCT GGGCTGTTGA GCAGCCAAGC ACACACCTGC 000240 000241 TGGCATGTTG TATTCAAGAG TGGCAGAAGA GGCCCAACCT GTGTTCATTC AGGTTGCCCT GTGCCATAGG ACAGAAGAGG 000320 000321 CACTGGCTGA ATGTAAGGAC ACAGCAAGAA AATGGTTGTC TATGAACCAG AAAGCAGGCC CTCACCAGAC ACGGAATCTG 000400 000401 CTAGCACCTT GATCTTGGCC TTCTCAGTCT CTGGAACGCC CTAGAAGAGT GCTAACATAC TCAGCACTCA ATAAATATTC 000480 000481 GGAGGATGAA ATGACACGCC GGCAGACAAG AACCCACGTC AGCTGCTCTT CCAGCATCAG GCAGTCCTGC CAGAACACCA 000560 000561 TACAGGTGGC TGTTGTTCCA GCTCTGAGTA AGGCAGCCAG GACCCCTCTG GCTGTGAAGA AGGGCTAATT TGGTTCTTCC 000640 000641 TGATTGAGGC TAAGTCTTCC TTCATAAGCC CAGTCTTTCA GAGCAAGCCC AGCCTGTTAG TAAGGAGTGC CCTCTGCTGA 000720 000721 CACAGACACA TTCCTGCTGT CTCGATCCCT GGTGTAAATG GAAAGAGACC ATCAATGTTG CAGTGTGAGC TGTGAGAATT 000800 000801 CAGCCAGTCC CAGCCTGAGC CCTCTGGCTG GGAGGGCTTC ACCTTCTATT GCTGCATCCA GATTAATTTT AAGGTCAAAC 000880 000881 CAGATGGAGA TTTGTGGTCA CTGAGTGATG AGCACCCTTT AGCCCTGTGT CCAGTTGCCC GTCTACTCTC CAAGCTGAGA 000960 000961 TTACCCCTCT GCCCTCTTCC TGTTCCTCCC CACTCTAAGA TCCATGTTCA AAGTTCCCAT ATAAATTGTG TCATCTCATT 001040 |
Predicted Small Protein
Name | NONHSAT006958_smProtein_185:364 |
Length | 60 |
Molecular weight | 7010.1062 |
Aromaticity | 0.101694915254 |
Instability index | 59.3372881356 |
Isoelectric point | 8.95465087891 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0388750094633 |
Amino acid sequence | MWPWCARSWAVEQPSTHLLACCIQEWQKRPNLCSFRLPCAIGQKRHWLNVRTQQENGCL |
Secondary structure | LLLLLLLLLLLLLLLHHHHHHHHHHHHHLLLLLLLLLLLLLLLLEEEELLLLEELLLLL |
PRMN | - |
PiMo | - |