NONHSAT006883

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT006883

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1867 nt

Genomic location

chr1+:156479646..156481486

Exon number

1

Exons

156479646..156481486

Genome context

Sequence
000001 CTTTTCACAG CTGCTCCTTG CGCTGCTGGG GGAGGTTGCT GAGGTATGGG GAAGAGGTAC GCTGTCGCTA AGCAACAAGA 000080
000081 GGCTGTGCAC CTGGAGGTCC TAGGAGGAGA CCCTGGCACC ATCGGTATGG GGGAGGCAGG GAGACAGTAA AGGGTTGATC 000160
000161 AAGCTCAAGG CTCCCTCTCC CATCCTCCCC AAGACAGTTA CAGAGGAGGG ATGTACCCAT CGCTCAAGAA GCCTGTTGAA 000240
000241 TTGGCTCACA ATCCTCCAGA AGGCTGCGAT TGTGCATGCA AACCTGTGTG ACATTCCATA GACTGAGAGT TGGAGAGGGC 000320
000321 AGGGGCTAGG GCATGAAAGA CAAGGGTGAG CATCTTTCAC ATCAATCTTG GAGGAAGGTC GAGGACTTGC CTGTCTGCTA 000400
000401 AAAGGTAGGA ACTTCCATGG AAGTGTAAAG GTCTGAGGGC GGAAACTTAG TAGGGAGGCG ACAGAATGGG AAGGGAAGCC 000480
000481 GGTTGGACCC TGGGGCAGCC TCCCAGTCAC AGAGGCTACC AAGGAGCCTA CACAGAAGGG AGGTGGCAGG GCAGCAGGGG 000560
000561 CCCCACACCC ATCAGCCATC TGCTGGAATT CTCAGTGTCC TCAAAGCTGA AGTGCTGCAC TGTATGCCGT TATTTTTCTT 000640
000641 CTCTTTTATT ATTGTTTTTT GGTGGACTGG AGTTTGAACG AGGTAACGAT CAAGAGGGAA AGACTCGTCG ATTGACCCTG 000720
000721 TCACCCGCCT CACTGCATCT CTAACAGGCC TGTAGCCCTG TAAACGTGAG GAGCAGCTCA GGGTTGACAG AGGGCCATTG 000800
000801 CCTCCCTTTT TCTGTCACTT CCTCCATTGC CTCAACCCCT GTCCAGAAGA GCGCACCTTC ATTCAACAAG CATGGATCAA 000880
000881 GCACTCGTGA CGTGCCAGCC AGGGCGCTGG GGAAATGATG AGGGTTGGGT TCCGTGGTGG CCGACACCCA GCCCCTCCTC 000960
000961 CACAGTGCCT GTCTCCTTGC TGGTATCTTG GCAGGCTCCC GTTCTCCCAT CAGACGCTAC ACTCACACAT GCTGCACATA 001040
001041 CTGGTGAATA GCTTCTTGCA GTCCATCCTG GCACGGTCCC CAAATTCCGC AGGGAACAGG GTGTGCTTCA GCCCTCTCCC 001120
001121 TCTCTCACTA AGGGCTAGGA AGTTTTGAGT CTTCCATCTC ACACACCCCA GAGGCTGCGT TGCCGGGAAG ACACAGGGGC 001200
001201 AATGTGAGGC CTTCTTATTC CTGACCCACG AGAACGATGC CAAGTTGGGG ACAAGAAGGG TAGAGGCTTG TTTTGCTTTC 001280
001281 ATTCCTGCTT TATGCCAGGC ACTCTGAAAG GCATTGTGTA CACTATTTTC ATCATCAGAC AATAGCCCAT AATACTTTGT 001360
001361 CTGACATCTG ACAAAGAACG ATCAGCCTCA TTTTACAGAT GGTGAAACTG AAGGAGCATG TTCATGTTCA TACAGCACAA 001440
001441 AGTGGCTCTG GGATTTCAAC CCATAGAGGA GTGTTAGAAT AATACCCTCA CAAATTCAAT GTTGAAAGTG CTAATGAAGT 001520
001521 CCGGGCGCGG TGCCTCATGC CTGTAATCCC AGCACTTTGG GAGGCCAAGG CGGGCAGATC ACCTGAGGTC AAGAGTTTGA 001600
001601 GACCAGCCTG ACCAACATGG AGAAACCCCG TCTCTACTAA AAATACAAAA TTATCCGGGC GTGGTAGCAC ATGCCTGTAG 001680
001681 TCCCAGCTAC TTGGGAGGCT GAGGCAGGAG AATTGCTTGA ACTTGGGAGG TGGAGGTTGC AGTGAGCTGA GATTGCGCCA 001760
001761 CTGCACTCCA GCCTGGGCGA CAGAGCGAGA CTCCATCTCA AAAAATAAAT AAATAAATAA TAAATAAAAA AAAAAAAAAA 001840
001841 AAAAAAAAAA TAAAAAAAAA AAAAAAA
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Predicted Small Protein

Name NONHSAT006883_smProtein_914:1147
Length 78
Molecular weight 8693.1802
Aromaticity 0.0909090909091
Instability index 78.5441558442
Isoelectric point 11.7866821289
Runs 11
Runs residual 0.00677583286279
Runs probability 0.0428449840215
Amino acid sequence MMRVGFRGGRHPAPPPQCLSPCWYLGRLPFSHQTLHSHMLHILVNSFLQSILARSPNSAG
NRVCFSPLPLSLRARKF
Secondary structure LEEEEELLLLLLLLLLLLLLLHHHLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLL
LEEEELLLLLLLLEELL
PRMN -
PiMo -