NONHSAT006584

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT006584

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4041 nt

Genomic location

chr1-:154128835..154155623

Exon number

5

Exons

154128835..154130197,154142876..154142945,154143125..154145454,154145560..154145677,154155464..154155623

Genome context

Sequence
000001 GAGCGCGAGC AGTAGCTGGG TGGGCACCAT GGCTGGGATC ACCACCATCG AGGCGGTGAA GCGCAAGATC CAGGTTCTGC 000080
000081 AGCAGCAGGC AGATGATGCA GAGGAGCGAG CTGAGCGCCT CCAGCGAGAA GTTGAGGGAG AAAGGCGGGC CCGGGAACAG 000160
000161 AGGTATGAAG GTTATTGAAA ACCGGGCCTT AAAAGATGAA GAAAAGATGG AACTCCAGGA AATCCAACTC AAAGAAGCTA 000240
000241 AGCACATTGC AGAAGAGGCA GATAGGAAGT ATGAAGAGGT GGCTCGTAAG TTGGTGATCA TTGAAGGAGA CTTGGAACGC 000320
000321 ACAGAGGAAC GAGCTGAGCT GGCAGAGTCG TGAGTATCTA GCTCCCCAAA TCTTGTCATT ACCAATTTAT CCCTTCCCCT 000400
000401 TTGGCTTGGG CACTAATATG AATAAATTAG CATTCCTTCA ACCTTGTTAA ACAGGGCCTA GGGAATGGGA GTCATCTATA 000480
000481 GTGCTTTTTT AGGCCCAAGA ATGGTTTTAG GCTTCCTTAT TCTCCTGACT AGTGACAAGT GACAAAAGAG GCTTTCTTAT 000560
000561 TTTTTGTTGG TAGGGTTTAC AAATTGAGAG CAAATAAGGA CTAATACATG GTGAACAGTT AATTGGAAGA TCCTACTGGG 000640
000641 TCCTTCCACC TGGGGTGGAA GACATCAAAG TGGCTATCCT GATTTAAGAT CTAGTGTCTG gctgggtgtg gtggctcaaa 000720
000721 cctgtagtcc cagctactta gtatgccaag gcaggaaggt tgcttgaacc caggagttgg aggccagcct gggcgtcata 000800
000801 gggagaccct gtccctaaaa caaataaaTT TAAAAAAAAA ATCTGGTGTC TGTTTTGGCC ACTTTGCCAA TCTGCTAGGG 000880
000881 AACCTTAGGG CAAGGGTAGA TATTAACTGC TCTCCCGTCG GTACCTTCTG GGCCTTGATT AACAAAGTCA GTGCTGAATG 000960
000961 CATATGTATT TGTGCTTCCC TCTTACATTC CCGTCTGCCA GACATAACAT ATCATGACCA TGGTGGTGTT CTCTTCCCAT 001040
001041 TTTTTGAATT TTTTTTTTTC GTTTTGCTGC TTGTTTTCTT GCTGTGTTCC TTTTTGACCT TTCTCCCTCC CCACAACCTG 001120
001121 GCTTGTGCCA TCCCCGTGAC TATCACTAAC AGCCGTTGCC GAGAGATGGA TGAGCAGATT AGACTGATGG ACCAGAACCT 001200
001201 GAAGTGTCTG AGTGCTGCTG AAGAAAAGGT ACTAACCATT AAGCCCACAG CAAGGTTATA TATGTGGTGT Ggttttgttt 001280
001281 tgttttgttt ttgttttgCA GCTGCCTCCC CTCCACTTGA TTTTGTTGAG TGCTGTCTCA TCTCTTCATG GAATGCTCCA 001360
001361 TTCTTTTCCA CTTACTTGGC ATCTTTCATC TCTTCTTTCC TAGTTGCTTC ACTGCCTCTC CACAGGGTCT CCTTCCTTTG 001440
001441 GGTGATTTGG GGGACTGTTT GGGTTGGGCA TTTGTTCCCA CCTCCACCCC AGGTAGCAGT TATGACTTGT TCCTGGTAGT 001520
001521 GGATTTCTCT CAAGTGCTTT ATTAGTATTC AAACATTTTT GAGCCCAGGA AGGTCTAGCT CCTGACACGT TCTATGGTAG 001600
001601 AGGGAGGAGG GTTGATGCTT GCTCAGGTTA CTTGGGAACA TCTCTTCCCC AGTATGCCTT CCAACTCTCT CTACATATAG 001680
001681 GTTCAATTCA CGTCTATGTG TCTCTCTCCC TTTTTTTATT CTCTTCCTTT TCCCTTTTCC TCTCCTGTGG TATTTAAAAT 001760
001761 ATTCACAGTA AGTGTTCTGA GCTGGAGGAG GAGCTGAAGA ATGTCACCAA CAACCTCAAG TCTCTTGAGG CTCAGGCGGA 001840
001841 GAAGGTAGGG GCTGGTTTGT GAAAGTGACA GGCTTTGGGG CCTGGGCCCA GCCCTGCCCT TGATGAAAGA CTGGAGACAC 001920
001921 GCATTCCATA TATAATCCAG TGAGGCGTGT CCTCTTCCTA CCTCCTTACC ATGTATTCAG GTTCTGGGTT TAATGCTATT 002000
002001 TTCTGTGCAC TTTGATTGCT TTAATTAAAA TAACTTCTTG GTCTCAGGTT ACTGGAGTCA TGTGCTCCTT AGGCTGATAC 002080
002081 TGCTGTGCTG AAAAGCAATA ATCAAGGGCC CTAACAGGCT TTCTAGCAGA CAGATGGGGG CAACAGACAG AATCAGCTCT 002160
002161 GAGACCTAAT GAGCAATCAA GACAGATGAC TTCACTTTGC CATCATGTGG GTGTGTTTCA GTCATGTGAC CTTGGGGTGC 002240
002241 TACTACTCTT GCTCATCAAG CAGGGGAAAG GAAAAACACC TCCTTGGGTT GATCTGAATA ATATCAAAGC TTAGATCCAT 002320
002321 CTTAAAAAGT CATGGAGAAT TTTAACCTGA GGATCTCATG GCTCTAAAGA CATAGATTTC TGAATTTCAA GGACCTATTG 002400
002401 TCCAGAGCCA GGCCTTGCTC TTACTCTTGG ACCATTCAGC ACATTTAGTG CAAGAGGATA TTCAATGTAA GTTAAATGTA 002480
002481 GGGAGGGGGG TATTGCCTGT GTGACTAATT TCTACTCTGA AATTTTTAAT CTACTTATCT TACAGTACTC TCAAAAAGAA 002560
002561 GATAAATATG AGGAAGAAAT CAAGATTCTT ACTGATAAAC TCAAGGAGGC AGAGACCCGT GCTGAGTTTG CTGAGAGATC 002640
002641 GGTAGCCAAG CTGGAAAAGA CAATTGATGA CCTGGAAGAT AAACTGAAAT GCACCAAAGA GGAGCACCTC TGTACACAAA 002720
002721 GGATGCTGGA CCAGACCCTG CTTGACCTGA ATGAGATGTA GAACGCCCCA GTCCCACCCT GCTGCTGCTC CTCCCTCTGA 002800
002801 CCCAGACTCC GCCTGAGGCC AGCCTGCGGG AAGCTGACCT TTAACTGAGG GCTGATCTTT AACTGGAAGG CTGCTTTCTC 002880
002881 CTTTCACCAC CCCCTCCTTC CCTGTGTCTT TTTCGCCAAA CTGTCTCTGC CTCTTCCCGG AGAATCCAGC TGGGCTAGAG 002960
002961 GCTGAGCACC TTTGGAAACA ACATTTAAGG GAATGTGAGC ACAATGCATA ATGTCTTTAA AAAGCATGTT GTGATGTACA 003040
003041 CATTTTGTAA TTACCTTTTT TGTTGTTTTG TAGCAACCAT TTGTAAAACA TTCCAAATAA TTCCACAGTC CTGAAGCAGC 003120
003121 AATCGAATCC CTTTCTCACT TTTGGAAGGT GACTTTTCAC CTTAATGCAT ATTCCCCTCT CCATAGAGGA GAGGAAAAGG 003200
003201 TGTAGGCCTG CCTTACCGAG AGCCAAACAG AGCCCAGGGA GACTCCGCTG TGGGAAACCT CATTGTTCTG TACAAAGTAC 003280
003281 TAGCTAAACC AGAAAGGTGA TTCCAGGAGG AGTTAGCCAA ACAACAACAA AAACAAAAAA TGTGCTGTTC AAGTTTTCAG 003360
003361 CTTTAAGATA TCTTTGGATA ATGTTATTTC TATTTTTTAT TTTTTTCATT AGAAGTTACC AAATTAAGAT GGTAAGACCT 003440
003441 CTGAGACCAA AATTTTGTCC CATCTCTACC CCCTCACAAC TGCTTACAGA ATGGATCATG TCCCCCTTAT GTTGAGGTGA 003520
003521 CCACTTAATT GCTTTCCTGC CTCCTTGAAA GAAAGAAAGA AAGAAGACTG TGTTTTTGCC ACTGATTTAG CCATGTGAAA 003600
003601 CTCATCTCAT TACCCTTTTC TGGGTTTGAA GCTGCTGTCT CTAGAAGTGC CATCTCAATT GTGCTTTGTA TCAGTCAGTG 003680
003681 CTGGAGAAAT CTTGAATAGC TTATGTACAA AACtttttaa attttatatt attttGAAAC TTTGCTTTGG GTTTGTGGCA 003760
003761 CCCTGGCCAC CCCATCTGGC TGTGACAGCC TCTGCAGTCC GTGGGCTGGC AGTTTGTTGA TCTTTTAAGT TTCCTTCCCT 003840
003841 ACCCAGTCCC CATTTTCTGG TAAGGTTTCT AGGAGGTCTG TTAGGTGTAC ATCCTGCAGC TTATTGGCTT AAAATGTACT 003920
003921 CTCCTTTTAT GTGGTCTCTT TGGGGCCGAT TGGGAGAAAG AGAAATCAAT AGTGCAACTG TTTTGATACT GAATATTGAC 004000
004001 AAGTGTCTTT TTGAAATAAA GAACCAGTCC CTCCAACCCT C
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Predicted Small Protein

Name NONHSAT006584_smProtein_92:352
Length 87
Molecular weight 9913.0962
Aromaticity 0.0116279069767
Instability index 60.5662790698
Isoelectric point 5.05023193359
Runs 10
Runs residual 0.0233425893787
Runs probability 0.0494612259318
Amino acid sequence MMQRSELSASSEKLREKGGPGNRGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKY
EEVARKLVIIEGDLERTEERAELAES
Secondary structure LLLLLLLLLLHHHHHHLLLLLLLLLEEEELLLLLHHHHHHHHHHHHHHHHHHHHHHHHHH
HHHHHHHEEEELLLHHHHHHHHHHLL
PRMN -
PiMo -