NONHSAT006556

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT006556

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2530 nt

Genomic location

chr1-:153901977..153905741

Exon number

3

Exons

153901977..153902918,153903015..153903540,153904680..153905741

Genome context

Sequence
000001 CTGAGTCTTC GCCGTTCCTC AGAGCGCCTC AGTGACACCC CTGGATCCTT CCAGTCACCT TCCCTGGAAG TGAGGATAAC 000080
000081 CCCTCCCACA CAGATGTGCT TGAACACACA TAGCACACAC TCACCCTGTC CAAGGCAGGA GATGGGGAGG AGGTGGGAGG 000160
000161 GGCTGGGGAA GGGGCATGGG CTCCAGAGTG CTGGCGGCCA GACAGCACCT ACTTCCCGAC TCTCCCTGCC CACAGATTCT 000240
000241 GCTGTCCAGC TGCTCCCTGT GCCGTGCCTG TGATTCGCTG GTGTATGATG AGGAAATCAT GGCTGGCTGG GCACCTGATG 000320
000321 ACTCTAACCT CAACACAACC TGCCCCTTCT GCGCCTGCCC CTTTGTGCCC CTGCTCAGTG TCCAGACCCT TGATTCCCGG 000400
000401 CCCAGGTGCC CAAGGCAGGG CAAGTGCTGT GGGTGGGAAT AGGGAGGTGA AGGTCCAAAA GCTGACCCCT GCTGCTATCC 000480
000481 CCCTGCAGTG TCCCCAGCCC CAAATCTGCT GGTGCCAGTG GCAGCAAAGA TGCTCCTGTC CCTGGTGGTC CTGGCCCTGT 000560
000561 GCTCAGTGAC CGAAGGCTCT GCCTTGCTCT GGATGAGCCC CAGCTCTGCA ACGGGCACAT GGGGGTAAGG GCTGGGCCAA 000640
000641 AGGGGCATGA GGAACGGGAA TGTTGCCCTG TGTGGGGCCT GTGGGGTGCC AGGGAGAGAT GGGCACATCT CTTGCCCTTG 000720
000721 AGGGCAAGGG GCATCCCAAA AGCTGTTGGA TGTGGTGGCT CAGTGGGAGG CAAGGCTCTG GGGATGTACA TGCCCTCTAC 000800
000801 TGCCCTCCCC CTTTGTGCCT GATAGGGAGC CTCCCGGCGG GTTGAGAGTG GGGCATGGGC ATACCTGAGC CCCCTGGTGC 000880
000881 TGCGTAAGGA GCTGGAGTCG CTGGTAGAGA ACGAGGGCAG TGAGGTGCTG GCGTTGCCTG AACTGCCCTC TGCCCACCCC 000960
000961 ATCATCTTCT GGAACCTTTT GTGGTATTTC CAACGGCTAC GCCTGCCCAG TATTCTACCA GGCCTGGTGC TGGCCTCCTG 001040
001041 TGATGGGCCT TCGCACTCCC AGGCCCCATC TCCTTGGCTA ACCCCTGATC CAGCCTCTGT TCAGGTACGG CTGCTGTGGG 001120
001121 ATGTACTGAC CCCTGACCCC AATAGCTGCC CACCTCTCTA TGTGCTCTGG AGGGTCCACA GTGAGTCTGG TATTTGGCCT 001200
001201 GGGTGGGGAG GGTGGGTCCC ATACCCAGAG GGCTCAGTGA TTCTGGTGGC CTTCTTTCCT TTCATCCAGG CCAGATCCCC 001280
001281 CAGCGGGTGG TATGGCCAGG CCCTGTACCT GCATCCCTTA GTTTGGCACT GTTGGAGTCA GTGCTGCGCC ATGTTGGACT 001360
001361 CAATGAAGTG CACAAGGCTG TGGGGCTCCT GCTGGAAACT CTAGGGCCCC CACCCACTGG CCTGCACCTG CAGAGGTATG 001440
001441 GTGCTACCAT CTGGGTGATC CCTGGTCTGT CCGGGGCTCC ACACCCCTTT TCTCTCACTC ATACACTTCT GCCTCCACTA 001520
001521 AAGGGGAATC TACCGTGAGA TATTATTCCT GACAATGGCT GCTCTGGGCA AGGACCACGT GGACATAGTG GCCTTCGATA 001600
001601 AGAAGTACAA GTCTGCCTTT AACAAGCTGG CCAGCAGCAT GGGCAAGGAG GAGCTGAGGC ACCGGCGGGC GCAGATGCCC 001680
001681 ACTCCCAAGG CCATTGACTG CCGAAAATGT TTTGGAGCAC CTCCAGAATG CTAGAGACCT TAAGCTTCCC TCTCCAGCCT 001760
001761 AGGGTGGGGA AGTGAGGAAG AAGGGATTCT AGAGTTAAAC TGCTTCCCTG TTGCCTTCAT GGAGTTGGGA ACAGGCTGGG 001840
001841 AAGGATGCCC AGTCAAAGGC TCCAAGCGAG GACAACAGGA AGAGGGATCC ACTGTTACCA AAAGTCCTGA TTCCCCCATC 001920
001921 ACCAACCTAC CCAGTTTGTT CGTGCTGATG TTGGGGGAGA TCTGGGGGGA GTTGGTACAG CTCTGTTCTT CCCTTGTCCT 002000
002001 ATACCGGGAA CTCCCCTCCA GGGTACCCAC AGATCTGCAT TGCCCTGGTC ATTTTAGAAG TTTTTGTTTT AAAAAACAAC 002080
002081 TGGAAAGATG CAGAGCTACT GAGCCTTTGC CCTGAATGGG AGGTAGGGAT GTCATTCTCC ACCAATAATG GTCCCTCTTC 002160
002161 CCTGACGTTG CTGAAGGAGC CCAAGGCTCT CCATGCCTTT CTACCTAAGT GTTTGtattt tattttaaat tatttattCT 002240
002241 GGAGCCACAG CCCCCTTGCT TATGAGGTTC TTATGGAGAG TGAGAAAGGG AAGGGAAATA GGGCACCATG GTCCGGTGGT 002320
002321 TTGTAGTTCC TTCAAAGTCA GGCACTGGGA GCTAGAGGAG TCTCAAGCTC CCCTTAGGAA GAACTGGTGC CCCCTCCAGT 002400
002401 CCTAATTTTT CTTGCCTGCC CCGCCTTGGG GAATGCCTCA CCCACCCAGG TCCTGACCTG TGCAATAAGG ATTGTTCCCT 002480
002481 GCGAAGTTTT GTTGGATGTA AATATAGTAA AAGCTGCTTC TGTCTTTTTC
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Predicted Small Protein

Name NONHSAT006556_smProtein_284:568
Length 95
Molecular weight 10222.9328
Aromaticity 0.063829787234
Instability index 45.6393617021
Isoelectric point 9.33306884766
Runs 9
Runs residual 0.0330712303423
Runs probability 0.0480676755186
Amino acid sequence MMRKSWLAGHLMTLTSTQPAPSAPAPLCPCSVSRPLIPGPGAQGRASAVGGNREVKVQKL
TPAAIPLQCPQPQICWCQWQQRCSCPWWSWPCAQ
Secondary structure LLLHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLEEEEEEEL
LLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLL
PRMN -
PiMo -