NONHSAT006297
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006297 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1030 nt |
Genomic location |
chr1+:150480570..150483028 |
Exon number |
4 |
Exons |
150480570..150480755,150482007..150482057,150482137..150482478,150482578..150483028 |
Genome context |
|
Sequence |
000001 GGTCCTGAAG CTCACAACCG TAACAGCCAC CAGACAAGCT TCAGTGGCCG GCCCTTCACA TCCAGACTTG CCTGAGAGGA 000080
000081 CCCACCTCTG AGTGTCCAGT GGTCAGTTGC CCCAGGATGG GGACCACAGC CAGAGCAGCC TTGGTCTTGA CCTATTTGGC 000160 000161 TGTTGCTTCT GCTGCCTCTG AGGGAGGCTT CACGGCTACA GGACAGAGGC AGCTGAGGCC AGAGCACTTT CAAGAAGTTG 000240 000241 GCTACGCAGC TCCCCCCTCC CCACCCCTAT CCCGAAGCCT CCCCATGGAT CACCCTGACT CCTCTCAGCA TGGCCCTCCC 000320 000321 TTTGAGGGAC AGAGTCAAGG TAAGGTCACC ATCCCATGCC CTCCTCAGTG ACCCTCCAGG TTTCTAATCT GGCCTATATC 000400 000401 CCACTTTTCA GGTGGAAAGG AGGGAAGAGG CCCTCGCCCC CACTCCCAGC CCTGGCTAGG AGAAAGGGTG GGCTGCTCAC 000480 000481 ACATTCCCCC TTCTATAGTG CAGCCCCCTC CCTCTCAGGA GGCCACCCCT CTCCAACAGG AAAAGCTGCT ACCTGCCCAA 000560 000561 CTCCCTGCTG AAAAGGAAGT GGGTCCCCCT CTCCCTCAGG AAGCTGTCCC CCTCCAAAAA GAGCTGCCCT CTCTCCAGCA 000640 000641 CCCCAATGAA CAGAAGGAAG GTAAGCAGCT CCCTCTCTTC TTTACCCACC TTTACCTCAT GGCCTTCCCC Cagagcatgg 000720 000721 gcttcggggc agacaagacg gtgggctctg ccactcacca gttgtataac cttgggtaag ttacatactt ctccaagcct 000800 000801 ttgtttcttc atctgtaaaa ttgaggatat acctgtttta gaaagttatg tgattagatg TGCAAAAATA GCATCTATTT 000880 000881 TCACTTGCTT CTCTGCTGAG TTCTTCTTTG TGCATGTAAA CTAGCCAGGC TTTCTCTGCT AGAGATGGCC ATCCCAACAT 000960 000961 GGCTTTTGCT TACTCCTTCT ACCCAGTAGA CCCACCTCTT CCATATCAGG AGGAGATAAT CATCCATTCC |
Predicted Small Protein
Name | NONHSAT006297_smProtein_116:370 |
Length | 85 |
Molecular weight | 8783.727 |
Aromaticity | 0.0595238095238 |
Instability index | 63.9678571429 |
Isoelectric point | 6.23626708984 |
Runs | 8 |
Runs residual | 0.0387473460722 |
Runs probability | 0.0226660484014 |
Amino acid sequence | MGTTARAALVLTYLAVASAASEGGFTATGQRQLRPEHFQEVGYAAPPSPPLSRSLPMDHP DSSQHGPPFEGQSQGKVTIPCPPQ |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLHHHHEELLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLEEEELLLLL |
PRMN | - |
PiMo | - |