NONHSAT005468

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT005468

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

803 nt

Genomic location

chr1+:117635409..117644371

Exon number

6

Exons

117635409..117635523,117637931..117637989,117638771..117638921,117640828..117640860,117641455..117641529,117644002..117644371

Genome context

Sequence
000001 GCTCAGTGCT TTGACCTTGT CAGAACTCCG TGACTCAGAG CCATCTTCCA CTGTTTCCCT TAACGGCACC TTCTTCAAGA 000080
000081 TGGAGCTTTT TGAAGGCATG CGAGAGAGCA CCAAGATTTC ATCTCTGTTG GCAGAATTGG AGGCAATTCA AAGAAATTCA 000160
000161 GCATCCCAAA AGAGTGTCAT TGTCTCTCAG TGGACCAACA TGCTGAAAGT TGTAGCATTG CACCTGAAGA AGCATGGACT 000240
000241 GACTTATGCC ACCATCGATG GCTCTGTCAA TCCCAAGCAG AGAATGGACT TGGTAGAGGC ATTTAACCAC TCCAGAGGCC 000320
000321 CTCAGAGATA GAGAAATGTT ATCCAAGATT TTAAAGAGGA ATCCATCACT TGAAGATCAA GCTTGTGACC GAATTTACCG 000400
000401 AGTAGGGCAG CAGAAAGATG TTGTCATACA CAGATTTGTT TGTGAGGGAA CAGTAGAAGA AAAGATCTTA CAGCTCCAAG 000480
000481 AAAAAAAGAA AGATTTGGCC AAACAAGTTC TATCAGGGTC TGGAGAATCT GTCACCAAGC TCACCTTGGC TGACCTCAGA 000560
000561 GTCCTTTTTG GCATCTAACC TCCTGTGGAT AAGGGCTCAG AATAGCACCA TTGCTGGTTT GTATTAGGAT CTGGGAATAA 000640
000641 CAACCTAACC ATGAGCCTTG AACTCTGTTC TTTGCATTTC AATTTCACCG TCAAGCCTTT CACCTTCCTC AAAATGAGGC 000720
000721 ATAATCTTAT CCCCAGAATT GAGGAGGGGT TGtgttaacc aattagttaa ccaattatgt taaTAATTTA TTTAATGAGT 000800
000801 GGT
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Predicted Small Protein

Name NONHSAT005468_smProtein_335:577
Length 81
Molecular weight 9055.5084
Aromaticity 0.0375
Instability index 44.5225
Isoelectric point 9.03082275391
Runs 11
Runs residual 0.00131578947368
Runs probability 0.0468356056593
Amino acid sequence MLSKILKRNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLS
GSGESVTKLTLADLRVLFGI
Secondary structure LHHHHHLLLLLHHHHHHHHHHHHLLLLLEEEEEEEELLLHHHHHHHHHHHHHHHHHHHHL
LLLHHHHHHHHHHHHHHHLL
PRMN -
PiMo -