NONHSAT005468
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT005468 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
803 nt |
Genomic location |
chr1+:117635409..117644371 |
Exon number |
6 |
Exons |
117635409..117635523,117637931..117637989,117638771..117638921,117640828..117640860,117641455..117641529,117644002..117644371 |
Genome context |
|
Sequence |
000001 GCTCAGTGCT TTGACCTTGT CAGAACTCCG TGACTCAGAG CCATCTTCCA CTGTTTCCCT TAACGGCACC TTCTTCAAGA 000080
000081 TGGAGCTTTT TGAAGGCATG CGAGAGAGCA CCAAGATTTC ATCTCTGTTG GCAGAATTGG AGGCAATTCA AAGAAATTCA 000160 000161 GCATCCCAAA AGAGTGTCAT TGTCTCTCAG TGGACCAACA TGCTGAAAGT TGTAGCATTG CACCTGAAGA AGCATGGACT 000240 000241 GACTTATGCC ACCATCGATG GCTCTGTCAA TCCCAAGCAG AGAATGGACT TGGTAGAGGC ATTTAACCAC TCCAGAGGCC 000320 000321 CTCAGAGATA GAGAAATGTT ATCCAAGATT TTAAAGAGGA ATCCATCACT TGAAGATCAA GCTTGTGACC GAATTTACCG 000400 000401 AGTAGGGCAG CAGAAAGATG TTGTCATACA CAGATTTGTT TGTGAGGGAA CAGTAGAAGA AAAGATCTTA CAGCTCCAAG 000480 000481 AAAAAAAGAA AGATTTGGCC AAACAAGTTC TATCAGGGTC TGGAGAATCT GTCACCAAGC TCACCTTGGC TGACCTCAGA 000560 000561 GTCCTTTTTG GCATCTAACC TCCTGTGGAT AAGGGCTCAG AATAGCACCA TTGCTGGTTT GTATTAGGAT CTGGGAATAA 000640 000641 CAACCTAACC ATGAGCCTTG AACTCTGTTC TTTGCATTTC AATTTCACCG TCAAGCCTTT CACCTTCCTC AAAATGAGGC 000720 000721 ATAATCTTAT CCCCAGAATT GAGGAGGGGT TGtgttaacc aattagttaa ccaattatgt taaTAATTTA TTTAATGAGT 000800 000801 GGT |
Predicted Small Protein
Name | NONHSAT005468_smProtein_335:577 |
Length | 81 |
Molecular weight | 9055.5084 |
Aromaticity | 0.0375 |
Instability index | 44.5225 |
Isoelectric point | 9.03082275391 |
Runs | 11 |
Runs residual | 0.00131578947368 |
Runs probability | 0.0468356056593 |
Amino acid sequence | MLSKILKRNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLS GSGESVTKLTLADLRVLFGI |
Secondary structure | LHHHHHLLLLLHHHHHHHHHHHHLLLLLEEEEEEEELLLHHHHHHHHHHHHHHHHHHHHL LLLHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |