NONHSAT005081
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005081 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
536 nt |
Genomic location |
chr1+:110581716..110582339 |
Exon number |
2 |
Exons |
110581716..110581928,110582017..110582339 |
Genome context |
|
Sequence |
000001 ATTTGGTGAG TTAACATGGG TCCATGCCAT TGTGAGGATT TTTCTAGGCT CAGGTGTAAC TGGTTTCTTG CCCTGCAGTG 000080
000081 ACAGACAAGA AGTGGACTGA GCTGGATACC AACCAGCACC GGACCCATGC CATGAGGCTC CTGGATGGCT TGGAAGTCAC 000160 000161 TGCCAGGGAG AAGAGACTCA AGGTGGCTCG AGCAATTCTC TATGTTGCTC AAGGCACGTT TGGGGAGTGC AGCTCGGAGG 000240 000241 CAGAGGTGCA GTCCTGGATG CGCTACAACA TCTTTCTCCT CCTGGAGGTG GGCACGTTCA ATGCTTTGGT GGAGCTTCTG 000320 000321 AACATGGAAA TAGAGTGAGC ATTTTTGAGA GGCTGAGTAG GGAAGGGGAG GCTGGGATGG GAAGGGGGAC AGAGCTTGCA 000400 000401 GAACTAACTG GCTTTGAGAG GGTTAAATGG GGCAGAAGTT CTGGTCCCAG GCTGTGTTCT GACCACCTGG GTTGAATAAC 000480 000481 GGAGTTGGTC ACTTACACCT TGAAGATTAA TGGAGACTAA TGACAGGTCC CTGCAG |
Predicted Small Protein
Name | NONHSAT005081_smProtein_131:337 |
Length | 69 |
Molecular weight | 7779.9852 |
Aromaticity | 0.0882352941176 |
Instability index | 47.0088235294 |
Isoelectric point | 4.87689208984 |
Runs | 8 |
Runs residual | 0.022853736089 |
Runs probability | 0.0472641759406 |
Amino acid sequence | MRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLEVGTFNALV ELLNMEIE |
Secondary structure | LLLLLLLEEEHHHHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHHHHHHHHHLHHHHHH HHHHHLLL |
PRMN | - |
PiMo | - |