NONHSAT004378

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT004378

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1386 nt

Genomic location

chr1-:90224796..90229337

Exon number

2

Exons

90224796..90225051,90228208..90229337

Genome context

Sequence
000001 TCTAGCACTA AAGCTAGAAG GGAAGCTTGA GGCCACATTG TGGAGTGCCA AGAGGTTTGA ACTTTTGCCT GGTTTGAACT 000080
000081 TTTACCTTCT TAATCTTTTC CCCGCATCCC CACATTTGAG GACAGGACAC CTCCAGGAAC TGCAGCTCAG CAACAGGGGT 000160
000161 TCAGCGTGAG CGCGGCCTGG GGAGGGTCAT CGCCTTTTTG GGGAGTGTGG GGAGAAACGC GGCTCGCCTT GTCGTGGCTG 000240
000241 GCGATACGCC TCTGCAGGAA GGGTGTGTCT CCCCGCTTGA GGATTCTCCC TATAGATAAA GAGGAGACTC AGCAGAGCCT 000320
000321 TAATTAGAGA TCACAGAGGA CTGACAACGA GCGTCCGGAA GACGAATTGG CAGCGAGGTG CATGGATTCG ATACAGAAGC 000400
000401 TGGAGATAGA GTCCAGCTAA CAGACCACTG CAGTTCGACG GAGCCAGAGT GAGGCAACGA GGAGAGATGT CGGGGAAGGA 000480
000481 AAGGGGATGG GACTTGGGGA CTGGAGCGGC TCGAGAGCGA CGGAGAAGGG GGCGTTAGGC TCTAAGGATT CTCTTACTGT 000560
000561 GCCTCCTCCC CGTGTCCTCG GGTGGCGGCT GCGCAGCCCT CCAGCCCTCA GAGCTGCCCT GCAGCACCTT GGCCACTAGG 000640
000641 AGGCAGGCCC GCCTTATCTG GAGCCCCGGC CGCCGCTCAC TCCAGGGAGG GCTGCGCTGC TGCTTAAATT CCAAGTCAGG 000720
000721 CCAGCCCCTG GAACGCTTAA TGGGAGCTTA GATTTAGAAC AGTTGATTTT CATTGAGACG GAAATTTGGA CAGTCTCCCA 000800
000801 CTTGATTGAA AACGGCTAGA AACAAGGCTT ACGGTAGAGC AATGAATGCC AGAGTGCAGG CGCCGGTGCC CAGGCGGCCC 000880
000881 GGGGAACAGG AGGGCCGGAG GAGGAAACAG CTGCCTGCAA AACACCAGCA GCGCCCTTAA TTAACACCAG TGCTGGCCAG 000960
000961 GGGGATTGTG CTTCCGGAAA TTCCCAACGT CCTTTCCCTG CTTGCCCAGG GCCATTCCAT TATACAGTTT CAGACCAGTC 001040
001041 CCAGGTCTGA AATGGAAAGA GATGTTACCC TAGATGCCCG GAGACAGCGG GGCCGCAGAG ACCTCGCACA GCCGAATAGC 001120
001121 AGTGGAGCAG GGAAGGAAGA GCTGAAGGAC CCTGGGGATG ATTGAACATA GCCTCTCACC AGCGCGCTCA GGAATTGTCC 001200
001201 TGAGAGCAGC AGGAGGAGTG GTAATCCTGC AAGAGAAGGT GGCTTTGTTG AGAGCCTTTA AATTCAGCTT TATTACTCGC 001280
001281 CAGTCTCCTT CCTTGTGTTC TGGCCATATT TCTTATCCAT TAGGCAGCCA GCCCTTCACA TGAGATCCTC CTGGTTTTGC 001360
001361 ATTCTTTTCT GCAATGCTGA CACTTC
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Predicted Small Protein

Name NONHSAT004378_smProtein_1157:1342
Length 62
Molecular weight 6571.6297
Aromaticity 0.0819672131148
Instability index 86.1442622951
Isoelectric point 10.2844848633
Runs 12
Runs residual 0.0439042773695
Runs probability 0.0526187952657
Amino acid sequence MIEHSLSPARSGIVLRAAGGVVILQEKVALLRAFKFSFITRQSPSLCSGHISYPLGSQPF
T
Secondary structure LEELLLLLLLLLEEEELLLLEEEHHHHHHHHHHHHHLEEEELLLLLLLLLEELLLLLLLL
L
PRMN LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLL
L
PiMo iiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooooooooo
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