NONHSAT003808

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT003808

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2232 nt

Genomic location

chr1+:68297971..68668670

Exon number

10

Exons

68297971..68298119,68500330..68500446,68537483..68537556,68564326..68564519,68565412..68565475,68566381..68566457,68583134..68583415,68586808..68586924,68603980..68604133,68667652..68668670

Genome context

Sequence
000001 ACTTGTTTGT ATACAACCAC GCCCGGCAGG ATGACCACCA GATGACCGGC CGCAGCAATG CCTCCACTCA GTCCCAGTTG 000080
000081 GGCAAAGTTT CACTCCACTG CGGCGACGTG AACAAGAATC ACGGCTTCCT TATCGTACCT GCCACAACAC ATGGGAATTA 000160
000161 TGGGAGTACA ATTTAAGATG AGATATGGAT GAGAACACAG AGCCAAACCA TATCAACTCT ATCTTCATGT TTGTTTACAT 000240
000241 TTCTCTCAAC TGTATGTTTT GTGACCCAGA ATGTGATCCT GGTAAACATT CCATTTGAGA AGAATGTGTA TTCTGCTGTT 000320
000321 GTTGGAAGCT GCGTTGTCAT TGATGAAGGA ATATTTCGAA GCGCTGAACA ATTCTTGATA AAGTTCCGAA ACAAACAAAG 000400
000401 CACAATCTTC CCTCGATTTA CATGGGAGTT GCATTCCTGG AAAATTCAGT ATATTTTAAA ACCATGCAAA ATATCCTTTT 000480
000481 AAAAAAATAT GTAACATGGA GTTTAGGACC AAGGCTCAGA ATATTTCCAA TCCATGGTTG GGTGCGGAAC CTGCGGATAC 000560
000561 AGAGGACTGA CTATAATATC AAGAGATCAT AAGGCTGTCG GAATGGACTC TTTGTGGCAA TAAGATACCA TATTATAAAC 000640
000641 AGGACCCAAG GTCATGCCAG GAGGCTCGTG TGGTCCCTGT TTGTCATCCA GTCAATACGG CCATCAGCTT CTGGCCCCAG 000720
000721 ACACCTTTCC TCTGCACTGT GGCACAGAGG AGCAGACTGC TTTGGAGGGC AGCTTCCTGG GAGCTCCAGG GACCCTGGCC 000800
000801 AGGCGGCCAC TGCCACTGAC TTCCTCGGCT CACTGAGCCC GTGCCTGCAG CTCTCGTGTT TCCTCTGTGC TGCAGTGGAC 000880
000881 GCTTATCTTC CCCCGATGGC ACATTTCTTT GTCACAGACA GGACCCTCAC TGGCAGTCGG AGGACATCAA GCCCTAGTAC 000960
000961 AGGAAGGGAC ATTTTCACAC TAATCTGTGC CAGCTGGAGC AGTCCTGCCA TCTGAACATC ATATTTTGGA ACCCTGAGAA 001040
001041 GCTAGGATGC AGTTAACAGC TAGATGTCAA TTCCCTGCAG GCAGAGACCA GTTCTCTGCT GCCATGTCTT TAAGGCCTGA 001120
001121 TGCACCATAG ATTAATTCAA ATCCAGTGTC TACCACTCAC TCGGCTTAAT GTAAGACAAG ATGAAGACTC CAGACTTCAG 001200
001201 AACTTCAGTG TCCGCAGATG AGGATTTTAA ATGCTTCGCC TACAACCTCA ATTGTTGTGG AGCCAAAGAT GCAACAGCTT 001280
001281 TGAAGAATAG AAGAATTACT CTATATTTGT CAGGATCTAC GTGGCAAACA AGCGCCACTT GGCTTACATT ACTTGCCTGG 001360
001361 CTTGGATCCC ATGGAATGGA GGAGCATTGG AACCAAGAGG AAAAAAATTA AAGTGCTTTG GGACAGCGAG CCAAACTCTT 001440
001441 ACATAGTATT TGAAATGGTG TGGCAAACAT GAAATTATTT TAGGCTCAAG ATTGGTGCTA GTTTTTTACC CTCTTTTTGA 001520
001521 AAAAATAGTA AAATGCACAT AAAGGGCCCT GCCAGAGGTT TAGCTCATAA AATCTGCCAA TCATTGGATG TGCTAATTGG 001600
001601 TGTAGCAATC CAGTGGTGGC CTGGATTAGG ACTCAAAAAC TGACCCTTAC CACCCTTGGT GTCCTGCAGC AAAGACAGCC 001680
001681 TAAATCGAAA AGACTGATGG AAGTATATCA AATTACGAAT TTCTCTATCC CTGAAAAATG CCTGCAATTT CTGTTTCTCC 001760
001761 ATCACTCCAG AAATACTCAA AACAGCAAAA ATTAAATACA TATGAAGTGA ACACAAAAGA CCTCCACAGA AAAATCAGTG 001840
001841 GCTCATCTGT TGACGCTATT GCTCATTGCT CGGCTGGCCA GTCATCTGGG CTAAGTTTTG ACTTTGGGCC AGTGCTTCAA 001920
001921 AATCAGCAAC CTTTCAGCCA AAAGACTGTG GAATGCAGCC AAGACCACCT GTGGAAAGTG AATTATAGCA TCTTTAATTT 002000
002001 ACTACCTTGG GCTATGATGT CAGAAACCCA GCATGGAGGG CGCACCAGTT CTTGTGTGGG AAATCTCTCA GAGCCCCCAT 002080
002081 GGAGGCCCCC AAAGTGGCTC TGGCAAAGCT GTAGGGGTGG AGGTAACAAA AAAGGGGACA CCTGGCTCTC CTTCTTAAAT 002160
002161 CAGCTCACCA TGGGCACACA TTTATATTGG AATTTTAGGG TCAGAAAATA CCAAAATTAA ATCTTCTAGA AG
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Predicted Small Protein

Name NONHSAT003808_smProtein_188:481
Length 98
Molecular weight 11250.0757
Aromaticity 0.144329896907
Instability index 42.2989690722
Isoelectric point 9.30047607422
Runs 14
Runs residual 0.0127911416571
Runs probability 0.0759393847631
Amino acid sequence MRTQSQTISTLSSCLFTFLSTVCFVTQNVILVNIPFEKNVYSAVVGSCVVIDEGIFRSAE
QFLIKFRNKQSTIFPRFTWELHSWKIQYILKPCKISF
Secondary structure LLLLLEEEEEHHHHHEEEEEEEEEEEEEEEEEEELLLLLEEEEEEEEEEEELLLHHHHHH
HHHHHHHLLLLLEELLLLLHHHHHHHHEEELLLLLLL
PRMN LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTTTTTToooo
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