NONHSAT003525

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT003525

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2273 nt

Genomic location

chr1+:59250832..59366668

Exon number

5

Exons

59250832..59250977,59359217..59359389,59361929..59362057,59364719..59365266,59365392..59366668

Genome context

Sequence
000001 AACAAGCCCA GAAGGCGGCG GACACTCGCA TAAAGTCACG CAGTAGTACT CGGAGCCCGG GGTAGAACCT GGACTTCAAA 000080
000081 TCTCTGCACT CCCGGCCGGG TGGTGGGCGC ATATCCTGGG TAGCCTCTAG GAAGCGCTAG ACGCATGGAA CCAAGGCAGA 000160
000161 TTCAGCCTGG CAGCTGGCAA GTCATGGAGC ACTGCCTGTC CATCTGCGAG CTAACAACAG TCGCGCTGGA AGTCAACAAG 000240
000241 GGAAATGGAA AGGGAGAGAC CCAGCCTCCA CAGGGGCTCA CGCCCTGGGA CCTGTGCCAG TGTGAACAAG GTTTTCCGGC 000320
000321 CCCAGGAAGC AGGCCTAAGT ACTCTCATTT CATCACTGAG GAGCCTGAGA CGTTCAGTCA TTGATTGGAC AGCCCTCACC 000400
000401 ATTCAAGCCC TCCTTGGTTT ACAGCAGCAG AAAGAGAGGC TCTGAAGGTT CTAGCCAGAG GAAGCTGCAG CCAGGCCTGG 000480
000481 CAGTCTCCCC TGCTCCCTTC CACCAGCTTG GTTCCTGTTT CTGCTGGTCC TGGGAGCCCC CAGCAGATGG ACTGCCCTTA 000560
000561 TCAGCCGGCT CCAGGCCAGA GGAGGAATCC CCCGGTCACG TGTGGCTCTC TGGAGGGAGA GAGACCTCAT AAATACATAC 000640
000641 AGCCCACGCA GAGGAAGGGG GGAGGGTCAA GGGGAAAGAA ACCTTGACAT TCTGGCGACT GGGCCAGGAT TAAAGTCCAC 000720
000721 CAGGCATAGT CCTTATTGGC TATTTCTATG AGGAATCTCA AATCCACATG GCTTCCCTGG ATGACAACGC TGACTTTGAC 000800
000801 TAGCCCTGGG ATCTGGGGCA TTCCCAGTGT GCTGCTGGCT TGATCCAGGC CTAATCCTTT GCCCAGGACT GACCTTTCAC 000880
000881 AGTTTACAGA GCACTTTATC TCCTGGCTCA GTGAAGTCTC ACAGAACCCT CCAGAGAGAA GGGAGTTTAT CATCACCCTC 000960
000961 AATTTACAGA TGAGGAAGCT GAGGCTGCGA TTGTAACTGA GCTCCATGCC CCGGGCGAGC CATCGTTCCT GCCTGGCGAA 001040
001041 GTCCACAATC CAATAAGGAG GGAAGGTTGA AGGGATGAAT CTCAACAGAA TTGTGCACAG TGAAAGAAGC CAATGAAAGA 001120
001121 AGAGTACATA TTGTATAATT CCATTTATAG AAAACTCTAG AAAATGCAAG CTGATCTACA GTGACAGAAA GCAGATCCAT 001200
001201 GGTTGTTTGG GGAAGTGAGG CAGAAGGAAA GGATTCAGAG AAGCACAAGG AACCTTTTAG GGTGGTAGAC ATGCTTACTA 001280
001281 TCTGGTACTG AGAGTTTCTC ATGTCTGCAC GTATCTAATT GTACACTTTA AATACACACA GTTTATTGTA TGTCAATTAT 001360
001361 ATCTCCATAA AGCTATTTAA AAAGAGGAAC GTAAGTGGGG AAAAGAATGA AGGAAGTTGG CTGGCGTATA ATTAAGTAAG 001440
001441 TCTGTGAGCA GTCTTAAAGT GGGGACACAA AGTACCATGG GCACGTAAGA GAAGAAGGTA GAGATTCATT CCCAAACGGA 001520
001521 AGAGATCAGG AAGGAGTTCT TAGAACAGGG TTTCAACAAA GCTCAAGGTA TGGATAAGTA AGGGTCAGGT TAAGAAAGAT 001600
001601 TCAGATGGAA GATACAGATA GAGTTTATTT GGGAAATAGA GAGTGGAGTA TTATACACAC GCACAATTCG CCTTTTTACC 001680
001681 CAAGTTTTGA AGGACTGAAG TTAAAACTAA CAGCAACTAT CCTCTCTTTT CTTCAGAAAT TCAGACACAT GCCCTACTTG 001760
001761 GCAGGCAGCT AGTTTTGCTA ATAAGATTCC TGCCCTTCTC CCTCCCTCTC TGTGCATCTC ATCCCTTCGG TCCCGCTGAG 001840
001841 GCCCCTACCC TCTCGGATTT CCTCTTTGAA CTGAACTGCC AAATACTTGC CAGCTTCCAG GGCCCTGAGT ACCCACATTT 001920
001921 CAGCCTCTTC CAAACCCCAG AGTAAGAAGG AGATTTGGGG AGTTCTGGGT GGGCATGTGA TGGGAGACTA GGTCCAACAT 002000
002001 AAAAAGATAT TTCCCTTTTT CTTCCATACT TTTTGGCTTA GTAATTGACA TGTGACCATT GGAGAATTTT GAATAGTTTA 002080
002081 TTAGAATACA TTGTGATAGA GAAGAAGGAA ATTCAAGAAT TGTTACAATG TTGTACACTG ATTAACTGGC TAATTTGCTG 002160
002161 CAAAACCAAT TCTGATCACT GCTCTTATGG TTTGTAATAC ATTATTTTGG GTTTGGATGA TCCTGTTATT CATAGCTTTA 002240
002241 CATAAAGAAA TATTCCAATG ACATATGAAA CCC
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Predicted Small Protein

Name NONHSAT003525_smProtein_1604:1771
Length 56
Molecular weight 6458.3395
Aromaticity 0.145454545455
Instability index 46.6565454545
Isoelectric point 8.15802001953
Runs 7
Runs residual 0.0242424242424
Runs probability 0.0447800741919
Amino acid sequence MEDTDRVYLGNREWSIIHTHNSPFYPSFEGLKLKLTATILSFLQKFRHMPYLAGS
Secondary structure LLLLLEEELLLLEEEEEELLLLLLLLLLLLLLHHHHHHHHHHHHHHHLLLLLLLL
PRMN -
PiMo -