NONHSAT002955
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT002955 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
906 nt |
Genomic location |
chr1-:46111452..46112357 |
Exon number |
1 |
Exons |
46111452..46112357 |
Genome context |
|
Sequence |
000001 CTCGGGAGGC TGTGAGGCAG GAGAATGGCG TGAACCCGGG AGGTGGAGCT TGCAGTGAGC TGAGATCGCG CCACTGCACT 000080
000081 CCAGCCTGGG GACAGAGTGA GACTCCGTCT CAAAAAAAAA AAAAATACTG AAAAGTATAA TTCAGGAACA TTTTTCTGAA 000160 000161 ATACATTTAG ATTTGAATCT ACAAATTGAA AGGATAGCCA GGATGACTAA GACATACTCT TACAAAATAC TAGACTTGAA 000240 000241 CAAAAAAAGA AAGATATCCT TTGGCCATTC AGGCATAAAG ACTGAGTTGT TAAGAGAAAG AAAACCAGAT AGACTGTGAC 000320 000321 AGCAAAGCTT TATAACAAGT AAATGGAGTA ACAATTACAA TAAAGAAAAT GTGAGCCAAA GATTTTGTGC TTTGTCAAGC 000400 000401 TAATGTTCAG TTATAAAGAT CACAGACAAA CATCAATGTG TAAGTACTTG GAATATTGCT CTTTCCGGCA TTGTTTCGCG 000480 000481 CTGCCACAAT GGTGTGTGTG AACATCCTAC CTGTTGCTCT CAAGAGTATC ACCAATGCCG AAAAGAGAGG GAAACGCCGG 000560 000561 TTCTTACTAG GCCATGCTCC AAAGTCATTG TCCAACTTCT AGCTGTGATG ATGAAGCATC GTTACATTGG CAAATTTGAA 000640 000641 ATCATTGATG ATAACAGAGC TGGGAAAATT GTGAACCTCA CAGGCAGGCT AAACAAGTGT AGAGCCCCAG CTTTGATTTG 000720 000721 CAACTCAAAG ATCTAGAAAA ACGGCAGAAC AATCTGCTTC TATCCCAACC ATTTGACTTC GTCATATTGA CAGCCTTAGC 000800 000801 TGGTATCATG GACCATGAAG AAGCAAGACG AAAACACACA GGAGGGAAAA TCCTTGGATT TTGTTTCTAG GGATGCAATA 000880 000881 CATATTTACA AATAAAATGC CTCAAA |
Predicted Small Protein
Name | NONHSAT002955_smProtein_488:601 |
Length | 38 |
Molecular weight | 4109.9079 |
Aromaticity | 0.0540540540541 |
Instability index | 58.4837837838 |
Isoelectric point | 11.0751342773 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0232417291241 |
Amino acid sequence | MVCVNILPVALKSITNAEKRGKRRFLLGHAPKSLSNF |
Secondary structure | LEEEELLHHHHHHHHHHHHLLLLEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |