NONHSAT002566
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT002566 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
550 nt |
Genomic location |
chr1-:39988116..39995214 |
Exon number |
2 |
Exons |
39988116..39988177,39994727..39995214 |
Genome context |
|
Sequence |
000001 AGACTTTTCA GTAAGGAAAG GAACCTGGGG TAGAAAGCTC CCCCTTCAGC TGCCCATGAG GGCACAGGTG GGCCCCACAC 000080
000081 TCACTACGGG GCCAGGGCAG GGCCGCACAC CTGCCACTTC CTCAGCAGAG ACCCTAGCGC GTGGGTCACT GCTGGCCCAG 000160 000161 ACTCCTTCCA CGAGCAGGCG AGTGTGCAGG GCCACACCTC ATCCAAGAGA TGATCACGTT TAGGTTTTTG ATGAAAAGCA 000240 000241 TAGCTCTCAG GTAAATACAG CAGCACCTCT AAGCATATTC TGGGAGGAGT GGGTTTTATG AGGAAGGCAC ACAAGGAACG 000320 000321 CCCAAATTTG CAAGTCCCTT TAAAATGAGC CTGCTCagaa ttgctgttta ttccacaggt ctgcgcaggc atggcactaa 000400 000401 gtgtcccatg gcacatttgg ccctcatgga ggcctcaaaa gggcaggacc agcaccctct tctacggagg aaggaacggg 000480 000481 cacagcagAA ACAAGGAGAG TCAGCAATTA CCAGCCAGCC AAGGTCCTGG AAGCTGACGT AGAGCTCGTG |
Predicted Small Protein
Name | NONHSAT002566_smProtein_344:541 |
Length | 66 |
Molecular weight | 7384.5178 |
Aromaticity | 0.0307692307692 |
Instability index | 62.9476923077 |
Isoelectric point | 10.967590332 |
Runs | 7 |
Runs residual | 0.0425961538462 |
Runs probability | 0.0495369318899 |
Amino acid sequence | MSLLRIAVYSTGLRRHGTKCPMAHLALMEASKGQDQHPLLRRKERAQQKQGESAITSQPR SWKLT |
Secondary structure | LLEEEEEELLLLLLLLLLLLHHHHHHHHHHHLLLLLLHHHHHHHHHHHHLLLLLLLLLLL LLLLL |
PRMN | - |
PiMo | - |