NONHSAT002499

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT002499

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2825 nt

Genomic location

chr1-:38520035..38678123

Exon number

7

Exons

38520035..38520377,38580255..38580365,38584663..38585202,38597608..38598253,38660005..38660575,38676234..38676494,38677770..38678123

Genome context

Sequence
000001 CTGCCTCAGG ATATGGTTCA GTCATCACCT CCTTCATCCA GCCTTCTCTA CCTCTTTGTC TTAACATTGA AATGGCCAGC 000080
000081 GTGTTCTTCT ACCTGCCTGC CAGACATGCA GGCCCAAGGT ACCAGGAGGC AGATGCTGAC AGATGCATCT CAGTATGCCC 000160
000161 GGCACCTCCA CCACACAAGG GCTGTGCTGG TTGCTGTGGG AATGCTGCAG GGCACAAAAC GGATAATGCT GGAGGGAGAA 000240
000241 GACAGCAAAC ACAAGGCTCA AGAAACTCCA GTATGTAAGA AGAGGACATG CACAATGGAA GAGGGAAGCC ACCATGCAGA 000320
000321 ATGTCGGGGT GCACTTTTAA ATGGGACAGT CAAGATGAGG AAACTGAGGC TTGGCGTCTC ATTGAGTGAC CTACCCAAAA 000400
000401 GTTACCCAAG GAGAAATGGG CTCGCAGAGA TTTGAATCCT GGTCTCCGGC CTTCCTTTAG ACACTTGGGT GCTCCCAAGT 000480
000481 CTGCATTTGG AGAGGGGAAC AGCATTAAAG TATCAGCTGG AGCTTCTCAG CTTGAAATCC TAGGCCTCTT CCAGAGGCCA 000560
000561 GATGTTCGGA TGGTACCAAG GGGCTCTCCG CTGAGTCCTA GGCTGGGAGC AGAGTAAACA CTTGGAAACT CAGTGTCCAG 000640
000641 ATGCCACGAT TTCTAGTAAG TATGGATTCA AATTAAATGC TGTGGTAAGT AGTATGTTAC CATACTTCTA ATCTTATTAT 000720
000721 TTGTTTAAAC AGAGGGTGCT TGCTAACCTC GTGCTTCTGT TAATGACTTG GGCACTCAAT GAGTTCGTGT CCACCCAGAA 000800
000801 AGCATTTGTT TAGCTGGCAG GCACCCAGGC TGGGCCCGGC TGTGTGCAGG TCCTGGGCTC TCACAGCCAA GTCAACTGCA 000880
000881 ATCCTGATGT CTGAGGAGCT CCTGGTCCAG TCGGGGGAGG GACCCAGAAA CAGGCTGAGT CTGCTTATGG CTGGAATTGG 000960
000961 GTAATGGCAA TGAGAACATG AACTTAACCC TTACTGTGGG CGAGGGGGAG GGCCCATCAG GAAAGTGCCT GGGGGCTGGG 001040
001041 TCCTGAAGAT GAATAGGAAT GTTCTAGAAA GTAAGCAGAA AGGCATACCT GGCAGAGGGT TTTGCAGGCG CAAGGACCTA 001120
001121 GAAGTACAGC AGGGTGAGGT GCATCTGGAG GAGAGTTTGG TGTGGGTTAG GATTTGTGGC TGTCAGATAT ATAGTTTTCC 001200
001201 TTCTCCTGCC ATCTCCTGTT TGAGTCTTTT AGAAACAGAG GAGGCTAAGG AAAGTGAAAA TGATTCCAAA GGAAACAAAT 001280
001281 CCCTGCCCCC ATTTCCTGAT TTGTCCACTG CCATGCCTCT GACCTCCTGC CTCCTCAGTC TCTGGTGTCC AGCAGGAAAG 001360
001361 AATCCAGGGC TCCAAATCTC TCCAGGGCCA TGTGATACCC TGGCCTATGG GAAGATGCCC TGGTCACTTT TCCTAGGCTC 001440
001441 CTCCAGGTAG CCGAGCCTCA GCCACCAGGG CCACAGACTT CTCTGCTGCC TTGAGGGACC TACGGGACTA GCAGGAGCTG 001520
001521 CTCTTCCTCG TACGACTTCT ACCCACCCAG GTAACCAAAA ACCTAGGTGT CCTTCTCAGT GACTCCCTTC CCCCACCCCA 001600
001601 CCATGTCCAG TCTATCCCCA AACACTGATG CTTCTACCTC TTAAGAGCAT CTCCCCAGTT CCACCTCCTG ACCCAGCCCA 001680
001681 GGCCTTATCA CCTTTTGCCT GGGGGTTTTG GCATTACTCA GCTCATCAAC TGCTCAGCCT CCAGTCTCTC CTTCTCCAGT 001760
001761 CCACACCGCA CCAGAGTGAG CCTTCTAGGA TGACCATGCC ACTCTCCTGT GTGAAACCCT TATCAAGGGC TTTGATGTTA 001840
001841 AGTGTTTTTA TTTTTATTTA TATAGTTTCC ATTTTTAATC AATATTTTTA TTTTAAATTG CATCCAAAAT CATCAGTGAA 001920
001921 GAGAGAGAAC TGCAAGGAGA AGGGAGAGTG GGGGAGGCAT AATCATTGCA AGATGTGAGC TGGAGTACCT TGTTTCTTAC 002000
002001 CAGAATCATC CTTCAGCACT GCAACGGGCC AGGCCCTGGG CTAGGGAAAT GTGGGGCAGG CAGGAATGAA TCTGCCCGAG 002080
002081 TCCCTGCCCA GAAGGACCTC TCAGCAGGTG AGAAGAGAGG AGACATTTCC AGGCAGCACA TGAGAGGAGC CATATCCAGG 002160
002161 GCGCAGCTGT CTGGGAATGA TCTGGGTGAC TAAGCAAAGA GGACCAGCCA GGGAAGGCAG GACTCAGGAC ACAGACAGGA 002240
002241 GGAAGCGTCG CCCTAAATCA AATCCCAGGA AAGGTCCCAC GATGACAGAA GGGATCGTCG TGGATCTGAG GCAGAAGTGC 002320
002321 TCTGAAGCCC AAGCTGGCAG GTCTTCCAGC AGGCAGTGCG GCTGCCTTTT ATTGTAAATT AAATATAGCT GCACTTCAGC 002400
002401 TTTCCAAAGA GCTGGGAAGG AGAGAAGGAG AAAGAAAAAG AGAGAGAGGA AGAGAAGAAA AGCTGCCGCC CTCAGGAAAG 002480
002481 TCGGTAAACT GAGGCATTCC ACCTAAGATC CCGTTCCTCG GTAGAAAGGA GAACAGGGAC ATGAGCCCTG CACACACTCT 002560
002561 GTGTTCAGCC ACAAACCAAA GTTGAGGCTC AGGGGTGATT TTATCTGCAA TGACAAGTCC ATCCCCAGGC TCAGACAGGT 002640
002641 ATTGTTCCAG GCCCAGCAGA CGTCCCCAAG TTAAACACAC ATCCAGGGCT CAAACAGACA TTGCCCCCAG GCCAGGAAGA 002720
002721 TGATGTACCA GGCCCAGACA GATGTTGTGC CAGGTTCAAA CACATGTCCT GAGCTCAGAC AGAAGCTGTC CCAGGGCCAG 002800
002801 ATAATGTGCT GGGCTCAGCC AGGTG
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Predicted Small Protein

Name NONHSAT002499_smProtein_71:277
Length 69
Molecular weight 7162.9454
Aromaticity 0.0588235294118
Instability index 62.8707352941
Isoelectric point 9.03863525391
Runs 11
Runs residual 0.0212639109698
Runs probability 0.0334184451831
Amino acid sequence MASVFFYLPARHAGPRYQEADADRCISVCPAPPPHKGCAGCCGNAAGHKTDNAGGRRQQT
QGSRNSSM
Secondary structure LEEEEEEELLLLLLLLLLHHHLLLLEEELLLLLLLLLLLLLLLLLLLLEELLLLLLEELL
LLLLLLLL
PRMN -
PiMo -