NONHSAT002423

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT002423

Source

NONCODE4.0

Same with

,

Classification

sense

Length

787 nt

Genomic location

chr1-:36944515..36948535

Exon number

3

Exons

36944515..36945117,36947079..36947138,36948412..36948535

Genome context

Sequence
000001 AGAGGCTGAG CCATTAACGA CAGAGCTCGG GGAGAGAAGC TGGACTGCAG CTGGTTTCAG GAACTTCTCT TGACGAGAAG 000080
000081 AGAGACCAAG GAGGCCAAGC AGGGGCTGGG CCAGAGGTGC CAACatgggg aaactgaggc tcggctcgga aaggtgaagt 000160
000161 aacttgtcca agatcacaaa gctgGTGAAC ATCAAGTTGG TGCTATGGCA AGGCTGGGAA ACTGCAGCCT GACTTGGGCT 000240
000241 GCCCTGATCA TCCTGCTGCT CCCCGGAAGT GAGTATGGCC AAGGATGAGG GTGCAGTGGG GAGGGGAAGC TACAAGGAGA 000320
000321 GATATTGGGA ATTTCCTTGC ACTGCCACAT GGCTCCTGGG ATTCCCAGAG AATCCCACAA GATTCAAGTC TGAGCCACAG 000400
000401 ATGTGGGGTA GCTGGTCTCC CACCCACAGA CTTCCACAGG Caaaccacca cccaagagga atggtgagac gacccgggct 000480
000481 ggtcatcctg gaaaaggcca gtgaggcgca gatcttgtcc gcaaatctct accaagctgt cagaagcaac ccatgggtcc 000560
000561 tatgcagcct tggtgggcag caaagggatc aggatggaag ctacaagggg acaggtttca tcctgaaata aagaagccca 000640
000641 ggcagagctt ggtttccaac catggaaact ctgtcttgag aggtagagaa cttcccatcc ccaggggtat gcaagctaaa 000720
000721 gccaggattg ataaagatgc tgtGCAGcag gggttggcaa actttttctg acagtaatgt ttaggct
[back to top]

Predicted Small Protein

Name NONHSAT002423_smProtein_284:466
Length 61
Molecular weight 6818.4197
Aromaticity 0.0833333333333
Instability index 46.7916666667
Isoelectric point 6.23504638672
Runs 10
Runs residual 0.0169326241135
Runs probability 0.00233174350821
Amino acid sequence MRVQWGGEATRRDIGNFLALPHGSWDSQRIPQDSSLSHRCGVAGLPPTDFHRQTTTQEEW
Secondary structure LEEELLLLEEELLHHHEEELLLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLL
PRMN -
PiMo -