NONHSAT002346

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT002346

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2588 nt

Genomic location

chr1-:35641982..35646083

Exon number

2

Exons

35641982..35642075,35643590..35646083

Genome context

Sequence
000001 GACTTGACTA CAGTCGAATA CATGTTGGGA ATCATTCCCA ATCATAAGAC ATCGTCGTTT CTGTAGGATG ACTGCATATG 000080
000081 TTCAGAGTAG CTTTTTGAAT TTGGTTCCCT TAGCTTTAGG GATGTGATGT TATAGTCCAA AATGTTTACA AGAAAACCTA 000160
000161 AGTCTTCAAA AGCACAACTT TTGTTGCTTA GGACTTTGCA TCAACTGTTG TTCCAGACCT CACTTCAACT TCTTGGTCTC 000240
000241 TGAACTGGTT TTAGCTAGCA TGCATGAGAG ACAGTTTTCA TGTATAATGT TTCTGCTCTG TAACTGGAAA GTGGTTTACT 000320
000321 TTGCATAAAT GCTGATGAAA ACTTCATGAC TATGAGACTT TTCTTCTGTG TATCAAGAAA AAGCTTGCTC GTTGGCAAGC 000400
000401 AATTCACAAG GTGGGGACAG ACTTGTACTT TAACATGTAG TCCATTCAAG CAAACAACTT TGGACTCTAC TGATAGATGA 000480
000481 AAGAGCAAAT GATGACTAGT TTAGCCTCTG CATATCAACA ATATAATGCA GATCAAGTAT AATGCTCAAT ATTAGTGACA 000560
000561 TGAGTATCAC TAAATTACAT AGAACCCTGA TGGGGTTTCC TGTGTCGTAA TCCATTAAAT CGGTGGCCAG TGCTTGCTGC 000640
000641 CGTGGTTTAG TGATTGGGTG TTAGAAATAA AAACTCAGGT CTATTTCTTA CCAGTCAGTA ACAATTTTTA GAGAATGTAC 000720
000721 TTGGTATATA ATATATGGAC TTCAGGAACT TTATTGGGGT GGGGGGTTAA TTTTGCCTTA CCCTGTTCAC TTTCAGATGA 000800
000801 TTAGGCTTTT GCACTTTAGA ATGAGAAACT TGTGACGTTA GTGTGTTCTT ACTAGCTTTA ATTTGTATGT AGCAATGAAT 000880
000881 TGTGAATCTT AGTGCAGTGG GTTTTTTTAA AAAACTCAAA AAGCTGGGAA TTAAGTGGTT TCAGTAATAA TGCTATACCG 000960
000961 AGGTGCTTGC ATTGTATTTC ATAATTTTGT TACAAACCAA AATTATTTTT AATGAGAACA GTCTTGGGTT CAGAGGTGTG 001040
001041 ATGCCAGAAT GTATTTTCGT ACTGTTAGGC CCTTGGAACA GATACCGGTG CTTTCTGAAA GATGAAAGAA ATGCAATGGG 001120
001121 TGCTCTTCAT GCAAGGTTGC AAACCTACCA AGAATGCATA ATAGTCTCAC TTTTCCCCAA TAAAGAGATG CGTGTGACTA 001200
001201 GTTTTGGACT TTTAACCTTA ATGGGGGTTG CATGTCTCCT ATTGTTAATC ATTGTCAGCT GCAGTGACAT GATCCACAGT 001280
001281 CCTGCATTTA CTGCCTTTCA CTTAATGATT TTGGACAGGT TTTAGAGAGC CAGGATGTTG GTCTGGGCCT TTATTTGGTT 001360
001361 TTGGCTTTAG CTGATAATGT TTTAGTGATG TCAGCTAGTG CAGTTCTCAA ATGGCTGCCT ATTAGGGAAA GAATTCAGAG 001440
001441 GATTTGACTG CTCCTAATCA TCTGTCATTG CTGCTAGATA ATGATTGGCA ATTTTTAAGA CTCAACTGGA AATCTCAACA 001520
001521 GTTGCTGGTA AACCATTAAC CATAAAAACG TTGCTTTTGA ACACCAGTGC TGaaaaaaat attttttttt ttttttttGA 001600
001601 GAGTGAAAAG GGCTTGGACT TAAGATAGGA CAATGTGGAG AATGGGGGGA AGAATGCAAA ACGATATAGT ATCCCTTATG 001680
001681 GATGGTACAT GTGCAACAGG GAACTCTTAC TTCATATACC CTTTGCAGTA ATCATTCAGG GAGGAAGAAA AACCTGGAAC 001760
001761 TTGAATGAAG GCTGATCTTT GTTTTGTGCA CTGTGGCCCT GCCAGGCATA TAGTGAAGGT GAATGTCTTC TCCCTCAGAA 001840
001841 AAAAATTGGT TCCTTGCTGT CCCAGTAAGG CATAGCTTTT CCAGCCCTAA CTTTAAAACT CAGTGAGGAC TTAGATGGGA 001920
001921 AAGAATGAGG TAAATACAAA GGATTGCAGG ACAACAACTA CAGCGTTGTG TACTGTGGGA AGGGGAGTTG GGCACTCTTG 002000
002001 GAGGACTCCT GCTGAAGGTG GTCAGCCTGC CTGACAATGG AAGACATACT TGAATGGGGA GCAGGGTATG TGCTTTCATA 002080
002081 TGAAAAAAGA GCTGATGTTA AAACTCATTT GGTGAGGTCA ACGTTGTCAC ATACCTTCAC ATAAGGGATA GTATATTTTG 002160
002161 GGTTGCAGTC AAACTTGTGC TCAGACTGGT GAAACTGAGA GTCAGGCTTT TACATTTTAA AGAAAATACA GTTTTCATTC 002240
002241 TAATTCAGGT GTCTACTTAT TTTATGTAAG AATAATTTTA GATTTCCCCC CCACCATGAA GTTTCTTCCT ATTTTTTTAT 002320
002321 GCTGTAACTT ACCCCCAATC TTTATCTCTG GATTTTTACT CTTTAAATTT TGAAGTTGAC TAGCATTTTC AAACCTTTAT 002400
002401 TTTATACCCT TGTCTTTTAT ATTAACTTTT TCTTATTATT CTTTAGGTAA GAATGATTGA TGTTGGCTGA TATTGGAGTG 002480
002481 CTCATTCACA TGAACAGGAT CAGGTGAGCT GTGTCCAGAA AACCAACGAG AAGGAGTGGA AGGAGGAATG AACGTTTCAT 002560
002561 TCTCGTTAAT AAAGGCATTA TCCTAATT
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Predicted Small Protein

Name NONHSAT002346_smProtein_1040:1324
Length 95
Molecular weight 10796.8975
Aromaticity 0.106382978723
Instability index 49.7255319149
Isoelectric point 7.66705322266
Runs 12
Runs residual 0.00115633672525
Runs probability 0.0489607254314
Amino acid sequence MPECIFVLLGPWNRYRCFLKDERNAMGALHARLQTYQECIIVSLFPNKEMRVTSFGLLTL
MGVACLLLLIIVSCSDMIHSPAFTAFHLMILDRF
Secondary structure LLEEEEEELLLLLHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEELLLLLEEEELHHHHHH
HHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHH
HHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTT
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