NONHSAT001583
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT001583 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1850 nt |
Genomic location |
chr1+:24399317..24410770 |
Exon number |
3 |
Exons |
24399317..24399468,24401540..24401676,24409210..24410770 |
Genome context |
|
Sequence |
000001 GCCTGGCCTG CTGACTGCTT CTTCGTGTTG CCTTTCCTGC TAAGGCGAGC TCTGAATCTA CGTGAATGTT TTGTACACAG 000080
000081 TAGGTGCTCA GTCAATATGG ACTGTGTGGA TGAATTGGCA GGGGCAGAGA CCATGCCTCA TTTTCCCTAG TAGGCAATAG 000160 000161 AGCAAGACCC TGTCTCAAAA AAAGAAAAGA AAAGAAAAGA AAAGAAAAGA AGAGAAAAAA TAGCACCATT GCAGCCGCTT 000240 000241 AAATGCACTC TCCACTCTTC TCACTAAGGT GGCAGTCAGC GTCCTCAGTA GAGAAATGTG CAGCTTTCAT GGATGTACAA 000320 000321 ACAGCCTGGA GACATTCCCA AACTTGCTAG AACAACTTTG TGGAATAAGT GGTCACCAGC GTGGTAGAAT TTGAAGGTTC 000400 000401 AGGTCAATTC TTCCTAAAAA TATTGCCCTT GATCCCATGG CAATGCCTGA GATGACACCG TGGAGGGGGT AGACCTAAGA 000480 000481 GTTTTAAAGG ATGTTTGCTT TTCCAGATCC ACCCTTAAAA CGCAAATACG CTAGGAAAGG TTCTAATTTA AAGCAAAGGC 000560 000561 AGCCAACCCC AAACCCAGCG CCACATGGTA CATCTTCAAG ACTTTGGGCT TTGTCCTTGA AAAAGAACAT GTGGCTGTTA 000640 000641 ATACCTGCAC TAATGCTGGG ATGCAAAAAC ACCGAGTCCT TTCAGAGCCC TCAAAGAGAA TTGTCATCCA GAGACACGCA 000720 000721 AGGATGCTCT AGCTTAGAGA AAAATGTCCT TCTCATCCTG TCCCTTCTTG ATAAGACCCA ATTGTGGACC TCTTTCTCTC 000800 000801 TCTTCACCTA TCAACGTTCT CCTAGAGCAA ATCTTGTTTT GCAGGGAGCT CTTCTCAGCC AGGCCTTCAT CTTTCTTCCA 000880 000881 TGTTGGATGC TTCCTGACCT TGAAAATTGG ACTCCAAGTT CTTTAGCTTT TGGACTGGGA CTTACACCAG TGGTTTGCCA 000960 000961 GGAGCTCTCA GGCCTTCGGC CACAAACTGA AGGCTGCACT GTTGGCTTCC CTACTTTTGA GGTTTTGGGA CTCGGACTGG 001040 001041 CTTCCTCGCT CCTCAGCTTG CAAACAGCCG GTTGTACGAC TTTACTTTGT GATTGTGTGA GTCAATAGTC CTTAATAAAC 001120 001121 TCCCTTTCCT ATATACATCT ATCCTATTAG TCTGTCCCTC TAGAGAACCC TGACTGATAC AGAAAGGGTG AGGGGTGGTA 001200 001201 TGGAGCCTGA ACTCAGGCCT CCCTGGCTCC AAAGCTCTCC ACTGCTCTGC CCTCCCCACC TCTCTCTGGG TTTAAGCTCC 001280 001281 TGGAGGGATG AGACCAAGGC ATGGTCATCT CTATCCATGG AGTCCTGCAA ATAGCACATT CTCAACAAAG TTTGTTGAAA 001360 001361 AAGACCATCT GGGTTCAAGT CCCAGTCCTG CCATTTACTA AGCTACAAGG GGCTTTGGCA AGTTATGTAA CCTCTCCATG 001440 001441 CCTCAGTTTC TTCATCTGTA AAATAATAAA AATAATAGTC CTACACATTT AGGCTTGCAG GTAGAACTAG ATGACCTCAC 001520 001521 ATATGAAAAA TGCCAGAACA GTACCTGGCG CAGGGTAAAT ATTGTGAAAT GCTGGGCTTC ATTATCATTA TGGCCCCCTT 001600 001601 TCAAGGATGC CTGGTGCAGG AAGAGGGGTG ATCTGGTTTG GCTCTGTACT CCCACTCAAA TCTCATGTTG AATTGTAATC 001680 001681 CCCAGTGTTG GGGGAGGGAC CTCGTGGGAG GAGATTGGAT CATGGGGGCG GATGTCCGCT TTGCTGTTGT CAAGATAGGG 001760 001761 AGCAAGTTCT CATGAGATCT GCTTGTTTGG AAGTGTGTAG CACTTCCTGC TTTGCTCTTT CTCCCTCTCC TGCTCCCGCC 001840 001841 ATGTAAGACA |
Predicted Small Protein
Name | NONHSAT001583_smProtein_743:925 |
Length | 61 |
Molecular weight | 6675.9242 |
Aromaticity | 0.116666666667 |
Instability index | 61.465 |
Isoelectric point | 8.52227783203 |
Runs | 9 |
Runs residual | 0.000265957446809 |
Runs probability | 0.0552415160259 |
Amino acid sequence | MSFSSCPFLIRPNCGPLSLSSPINVLLEQILFCRELFSARPSSFFHVGCFLTLKIGLQVL |
Secondary structure | LLLLLLLLEELLLLLLLLLLLHHHHHHHHHHHHHHHHLLLLLLLEEEEEEEEEEELEEEL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTiii |