NONHSAT001007
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001007 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1125 nt |
Genomic location |
chr1-:14716980..14735931 |
Exon number |
2 |
Exons |
14716980..14718074,14735902..14735931 |
Genome context |
|
Sequence |
000001 ctcaagcgct cttgttgtct tcctgggcag gtggtgccaa taggatgtac tgacagatca gaagtggtcg tgagagaagg 000080
000081 agcaagtagc cagaagagtg aagtgtgcac tggctgagat gtgggagcag gtgttgttgg tttccccgga gtaagttacc 000160 000161 ttgagtgagt taaggttaag atatcccagg ggtgaggttg agcaggcagt tgtgtatgtg accctgggga aagtctagct 000240 000241 gaagatacaa agatgggatg agatcaccaa ggagtaagtg tctttagcaa agagaagaga ccaaggactg aatctggata 000320 000321 cctcaacatt tggagtcaga gcctgaaaag gatccctcaa aagtgcccaa gaagcagcag aatgaggaaa gacagcccag 000400 000401 ggagtgtggC Acagctgctc ctcaccactt caggctcccc tggagtccaa tgcactgggg cctcattcct gggtattata 000480 000481 attgcctcct aagtggcctc tggcttatgt ctcctacccc agttgatgtt catcacatca gccagagtgg ctctgttaac 000560 000561 acccaagcca gttcctgccc atctgctgag aatcttcaag ggctttcacc tcactctgag tcgaagccaa tatcttcaca 000640 000641 atggcctggc cctttgccaa ctgctgtggt ttaaatgttt gtacccttca aaacttaggt tgaaatttgc ttggcaacat 000720 000721 ggtggtggca ggaggtggaa cctttgggat gtgatagggc caagggctct gccctcaggg gtaggattaa tgctgttaca 000800 000801 aaagagcaag tttgactttc ttttgcctct ttgcccttct accttccttc ctgggaggat gcagcaagaa ggccctcgcc 000880 000881 agatatcaag gccttaagct tggacttccc agcctccaga actgtgagtc aataaatttg tttattaaaa atcacccagt 000960 000961 ctcaagcagc acaggtggac taagacacca cctctctgaa tttacctcca gctactctgg tgtttactga gtccagcaat 001040 001041 acaaaacatg atcctccctc agggcattca caaatgctgt tctccctgca tggaatgctc atcccccaaa acatttgcac 001120 001121 agctt |
Predicted Small Protein
Name | NONHSAT001007_smProtein_449:673 |
Length | 75 |
Molecular weight | 7881.8222 |
Aromaticity | 0.0675675675676 |
Instability index | 82.3378378378 |
Isoelectric point | 5.97369384766 |
Runs | 9 |
Runs residual | 0.0210283454186 |
Runs probability | 0.0390881077156 |
Amino acid sequence | MHWGLIPGYYNCLLSGLWLMSPTPVDVHHISQSGSVNTQASSCPSAENLQGLSPHSESKP ISSQWPGPLPTAVV |
Secondary structure | LLLLLLLLHHHHHHLLEEEELLLLLLEEEEELLLLLLLLLLLLLLHHHHLLLLLLLLLLL LLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |