NONHSAT000706
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT000706 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
983 nt |
Genomic location |
chr1-:7549175..7550066 |
Exon number |
1 |
Exons |
7549175..7550066 |
Genome context |
|
Sequence |
000001 ATCCAATATC CCGGCGTGGA ACATTTCCTC GGGGATCCAA GTGCCCTCCC GTAACCGCTG AAAGTCACCC CATCTGCTGA 000080
000081 GCAGCCAGAA GCAAGCTGAT GATGCCAGTA GCCAGTCACC CCGTCTGCTC GGGGCCAGAC ATGGAGGAGT GGGGACGGAC 000160 000161 ATGTCCCACC CTCGTCTAGG TCATGGGATG CTGGCCGAAG GCCCCTGGCA TGGGAACTGC TCCGGGCCAG GGGTTGTGGA 000240 000241 GGGCTGGACA GGAAAGGAAT GAGGATCGCC TCCACCACTA CAGCCTCAGG AGGGTGGGGA GGCTGGATGC GTGCCACTTT 000320 000321 AACGAGTGTG TATTTACCAA ATGGATAAAT TCTGCGCAAT GCTTTGCATT CCAAATAACT TGCCACCAGG TCCCTTGTGA 000400 000401 GTCTCCACCT GCCTAGACTG TGAGCTTCCT AAGGGCTGGA TCACCCCTGC AACCCTAGCA CCTGGCATAC TACCTGACCC 000480 000481 CTAACACGCA TGGATGCCTA AGGAGTGAGT TCCTCCGACA CCTGGAGAAC GAGATGCAGA GGCTCGCCGG GAGCCCCAGT 000560 000561 GCCCTGCATG CCAATGGCAC ACATCTTCTC CAAACACAGC CTCTCTCTAA AGAGCTGCCT CAAATCAGCC ATGCCTTGCC 000640 000641 CTGACAGCTG TTTCCTTCCC CTGCAAAGAC CCTCGAAAGA TCTCTTGGCT GTGATTTGAT TTGAGCTCTT CTGGAAGGTC 000720 000721 CTATAGAGGG CCTTATCTAG GTTGTTGAAT CTTTTTCAGC ATCTGGAAAC GGGGGACAGA AACAAATGGG AGTGTGTCTA 000800 000801 GGGGGCGGCA GGCATCATGG CCCCCCTTCC CAGGCCAGGG CCCACCTGTG GCAAAGGAGG CCCCAAATAA TAGCCATCCT 000880 000881 GGTTTTCTTG CAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 000960 000961 AAAAAAAAAA AAAAAAAAAA AAG |
Predicted Small Protein
Name | NONHSAT000706_smProtein_182:415 |
Length | 78 |
Molecular weight | 8701.8412 |
Aromaticity | 0.103896103896 |
Instability index | 70.4194805195 |
Isoelectric point | 8.30438232422 |
Runs | 9 |
Runs residual | 0.0191981931112 |
Runs probability | 0.0382146852735 |
Amino acid sequence | MGCWPKAPGMGTAPGQGLWRAGQERNEDRLHHYSLRRVGRLDACHFNECVFTKWINSAQC FAFQITCHQVPCESPPA |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHLLLLLLLLLLLLEEEEEELLHHH LLEEEEEEELLLLLLLL |
PRMN | - |
PiMo | - |