NONHSAT000696
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT000696 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1731 nt |
Genomic location |
chr1+:7152787..7154516 |
Exon number |
1 |
Exons |
7152787..7154516 |
Genome context |
|
Sequence |
000001 CTTTCTGGTC ATGGGTCTGT GGGCTGCCTG TGGCTTTGGG TTGAGGTCAG GTCTGCTGTG TGCATCATTT TGCTGTGGGA 000080
000081 CCTAGGCTGA GGAAGCCCCC TCTGCCTGGG AAGTTGGCGT CTCCCAGAGG AGGGCAGAGG CTTACAAGCC CAAGGCAGTT 000160 000161 GATGCAGGTG CAGTTGAAAC TCCTGCTCAG ATGTGGCATC ATATGTCATG CCTGCTGATG AATCCACTGG CCAAAGCAAG 000240 000241 TCCCCTGGCC AAGCCCAGTA AGAATGGGGC TGGGAAGGAC ATCCCTCCAC AGAGTGGGGG CAGGGGTGGG CGGTGGAGAG 000320 000321 GATGGGAATA CAGTGCACTA TTTGGTGAAT ACGGCCATGT TAAACTAGAG AGCCTGACAT GCTCATTTCC CCTTTCTTCT 000400 000401 GCGGCATCTT CTTGGAGGAC ATCATTCTCA AACTTGAGCA GGCATCAGAA TCAGCTGAGG GCTCATTAAA ATGCGGGCCC 000480 000481 CACCCTAGGG TTTCTGATTC AGCAGGTGCG GTGCAGGGGG CCTGAACATG TGTTATTTCT AACAAGCTCC CAGGCAGTAG 000560 000561 GATGTGGCTG GTCTGGGACT GTACTTTGAG GGCCACTGGC CTAGTTTTCT GGGGGAGAAG GAGGCTTATC TGATTTCTGC 000640 000641 CTCTGGACCA TTTCCTGACT TCCAAGGGTG GCCCTTATCT CAAGCAGCCG CCAGCCTCTC CTTGCGCCCT TCACTCTCCG 000720 000721 CTGAAACACT CCTTGAATCT AAGTGGAAAG AGAAGAGCTC CTCCTTAGCC AGAGAGGGAG CTTCTCTGGA ATGCGTCCTG 000800 000801 GGCCAGACAT CTGATTTCAG ATACGCAGAC CCGTGCTGGG TTTCAGCCAC CCTTTGACGG CAGAACAGTA GAACATTTCA 000880 000881 AGGCAGCGGT TTTACCTCGA GTTTCAGCCT TTGGAATTTG GGTTACAATT GAGAAGGGGA TGTCACTCAG GGTCATGCCT 000960 000961 GACTCGCATG ACTTTCTGGA ATATACATAG AGCCAAGAGA CCCCACCCCG AGGCACAGGG TGTGTGCCTG GCAGAAGAAG 001040 001041 GAAGGTGGGT TTCAGATGTG GTCAAATCCG GGTTTGAGCC CTGGCTCCGT CACTCAGTGG CTTTGCGACT GTGAAAAGGT 001120 001121 CATCTTAGCT CCTTTAAAAG CCCTGGTTTT TCTTCTTCAT ATAGAAAATG GAGTTGCTGT TGATCCCGCC CTTGCTGGGT 001200 001201 CACGATGAGG ATTGAATGTG GTCACGTTTC TGATTCTGCT TCCCATGCCG TCGGGTCTGT CCATGCACAG GTGTCACTGT 001280 001281 GCCTCTTATC TGTGGGGCAG TCCCCAACCT GCTGGATGCT TTGACTTCGA CAGGCGTCTG CCAGGATTTC TCTGGGTTTG 001360 001361 GAAGGACGAA TTTCTTTCCT AAAGGCAGAG GGTGAAGACG GAAGGTTTCC TATTAGTATT ATAATATCCA CTCCATGTTT 001440 001441 ACACTTGAAA GCTTCTTGTC CCAGGAGAAG CAAAACTTGC TGTGGTTGTT CAAGGACCTT CCTAAATTAG TTGTTGAGTT 001520 001521 GTGTTTGGAT CCCCACCCCC ACCCCATCTC TAGTATTGAA ATTAATTGGT GCAGTTAACT GCTGAGTTCA TACAAACTGG 001600 001601 CCTCCTGGTA TTAAGGAATT AATGACACCA ATACTCTGCT GAATGAGAAG GCAATACAAC TTCTGTTTGC TGCTGCCGCC 001680 001681 GCCACTGCTA ATTTCATTTT AGAAAATTAA TAAAAATGAA TTGCACCACT G |
Predicted Small Protein
Name | NONHSAT000696_smProtein_1055:1207 |
Length | 51 |
Molecular weight | 5318.1971 |
Aromaticity | 0.06 |
Instability index | 44.702 |
Isoelectric point | 5.46429443359 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.0443889267418 |
Amino acid sequence | MWSNPGLSPGSVTQWLCDCEKVILAPLKALVFLLHIENGVAVDPALAGSR |
Secondary structure | LLLLLLLLLLHHHHHHHLLLHHHHHHHHHHHHHHHHHLLLEELLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiii |