Lnc-TEAD4-1:1

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Annotation

Name

lnc-TEAD4-1:1

Alias

NA

Disease

Disease: breast cancer (PMID:26957268)

Dysfunction type: NA

Description: It might play a role in HER2-positive breast cancer.


Function

Function Mechanism: NA (PMID:26957268)

Biological Process: pathogenic process

Description: NA




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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

lnc-TEAD4-1:1

Source

LNCipedia2.1

Same with

NONHSAT025500

Classification

intergenic

Length

3485 nt

Genomic location

chr12+:3150603..3154116

Exon number

2

Exons

3150603..3152614,3152644..3154116

Genome context

Sequence
000001 ACTTAGATAT GCAGCTGAAG GGGTTCCTGG GTTTATTTCT CCTGAGAACT GGCATGGGCT CTGAGTTTTG CCATTCCTGG 000080
000081 CTTCGGTCCT AGCATTCTAA GCTGCCTGAC CTTGGGCATT TGTCAACCTG TCTGAACCTT AGTATCCTTT CCTCTCTGTA 000160
000161 GAGTGGGAAG AGATGGAGTC TGTGAAGCGC CTGGTGCAAG CTGTACTAAT ACACCTAACA ATGAGCTCCT CCCTCCCTGC 000240
000241 CTCCTTGCCT CCCTGCCTCC CTCCCTCCCA TGGGGAGGCC AGAATCTGGC TGCTTGCTGC CACCTAGTGG CTCTTTGGGG 000320
000321 TCATCTTCCC TCATAGGAAC CACAGATCCA GTAGCCTAGA GCAGAAAGGG AAGGAAGATT CAACCTAGGG GTGTTTATGT 000400
000401 TTACCGTGTG TCTGGCACTC GTGGAGATAG TGCATGGGAC TACATAAGTA AGACAGCATC GAAGAGGTGT CTTGGAGTGT 000480
000481 GGTTAGGAGC GAGGGCTCTG GAGTCAGACA AGCTACAGAC TAGCTGAGTG ACCTTGGGGC AAGTTATTTC ATTTCACTGT 000560
000561 GCCTCAGTTT CCCCATCTGT AAAATTTGTA TAACGATAAC CTACCTCGCG TATCTACAGT GCCTAGCATA GTGCCCCACA 000640
000641 TAAATGTGTT CACTAAATGT ACGTCGTTAT TAATCATAGG AGCTTGCAGT CTCACTAGGG CCGACTGGAA AACTATTAAG 000720
000721 TGATCCTCAA AGCCACAGGC GCTCAGAGAC TGGAGAGATC AAGGTGCAGA AGACTCAGGG AAGGGTAGTC TTGAGGGCAG 000800
000801 CTGCCCTTAA AGGGTGGGCA GCATTTAGTG AAGCAGATGG AGGGAAGTTG ACCGGCATCC CAGATGTGGG GAAGAGGCCA 000880
000881 GCAGCCTAGT CTCCTCCACG GCCCAGCCCC CACTGTCTTA CCAAAGAACA GCTTTAACCA AACCCCTCTG GGCATCAGGA 000960
000961 CCACCGCTAC ACCTCTTGCC AGGCTGCAGA GCTATGCAGT CTGGAGGCCC AGCTCTCGTC AGAAGCTGGG GCATGGGCTC 001040
001041 TAGGGGAACC TGGGGTCGGA TGAGCCCCTG AGCAGGTGGC AGGTGCCTAC ATGTCCCAGT GTGGGTTCGT GTTTGTGTAA 001120
001121 GGCTCTCCTG CCCCCACCCC CAGGCACCAG CACAGCCTTT GCCTTCACTC TCTCCCCTCC CCTGTCCCTG GGGGATTGAA 001200
001201 TAAGGGAAGC TGGGGTTGGC CGTCCTTCTA GCTTGATTGG CAGCACCAGC GCTGTGACGG AAGGATGTGT TGTGCCAGCA 001280
001281 GCCTCTTGGC CGCAGGACAA ATGCACATTT AAAGAGATAA CCTTTTTGTG TCCTGGCTGG GAAAGAGGTC AGTGCAGATG 001360
001361 TTTTTGGGTC CAGGTGTTGG CTGTGAGTTT TCCTTTCCTC TATGAACTGA CCTCAGCAGC CTAGTGGACA GTCACCTCCT 001440
001441 TACAGGTGTA AAATCCAAGC CAGTCAACCA TAGCAGGTGG CAGACTTAGC TGCCTTCCCT GTGGTGTGGT GCAGACCATG 001520
001521 ACCCTTGAGG CAAATGGGTG AGCTGGCCCC ACCTCGCCTG CAGCCTCCTC TGAGGCTCCC CTGCTGCCTC CCCACTAGCC 001600
001601 GCCCTGAATC ACCTACTTCC CAGCACCCCC AGCCCGTGGT TCTCATCCCG TCTTCCATCT GTGATCTGGC ACTCATTCTT 001680
001681 CCAGAGCCAA AGAGGAATCC CCTCTTCTCA TGCAGAAGAC AGTCATGCCT GCCCTTGTGT GTCAAAAGCA TTGCATTTAT 001760
001761 GCCCTGTTAG AACCCCTGTC ACAAGCATGG TGCCTGAACA CAGGTGCCTC TGTGGTCTCT TCTCATCCTC ACCCAATGGG 001840
001841 TACTATGCTA GCCCCATTTT ACAGATGAGG CAAACGTGGC ACGGAGAGCT CCACTAACTT GCCTGGATGA TTCATGCATC 001920
001921 CATCCATTCA CTTAGCAAAT ACTTATTTAA CTTCTGCTTT GTGCTAGCTA GTGGGGATGT GGCAGTGGGG ATGTGGCAGT 002000
002001 GGGGATGTGG CATGGGGATG TGGCAGTGAG GAAGACGACA GACAGGCTCC TTGGGAAGCA GAGTAAGCAA GTGAGGAGAC 002080
002081 AGGCGGGCGT GGTGAGGCTG CGCAGGCGCT GAGATCGAGT TGCTGGGGGA GGCCTCTCTG AGGTGGTGGG GCTTGAGTTG 002160
002161 ATTCTGAAGG ACAAGAAGAG CCAGCCCTGG GGGTCTGGGG GAATGGTATT CCAAGTGGAG GGAACAGCAG GTGCTGGGGG 002240
002241 CAGGGAGGTG ACAGATGTGT CCCAGGTACA GAGAACAGAG TGAACAGGAG AGAGGAGGGG GCCAGGGCAT TCCAGGTGGG 002320
002321 GAAAGGCAGC AGGTGGCCCG GTGGTACCAC CTCTTTTGGC GAGGGCTTTG GACCTTACCC GGTGTGATGG GAAGTCCTGG 002400
002401 AAGTGTGTTA AGCAGGGGAG TCTTTTTGAT CAGATTTTCT AGAAAACGAC AGTGGGCTGC TGTGGACCTC AGAGAGGCAT 002480
002481 GTGTGATAGT GTGTTTCGGG CTCTTCCCAC GAAACTCGGC TCTGCACAGT GAGACCTCAT TTCCTGGTTC TGTTTGATGA 002560
002561 GTGAGCGAAT GCACATGGCA GGCGGTCATG TCCCTTGGGC CTGTGAGGTG AGGAAGGGTC CCTGAGCCCT GTGGGGATAG 002640
002641 AGACTCTTCC ACCATTCTGA CATGATCCGA GTTAGCAGGC AGCACTGTCC AGATGGAAAT GGGGATGGGA GACAGACCAT 002720
002721 CTCTCTCAGC GGGTCCAGCC ATGAGCCAGC AGACTGTTTC CCATTGGCCC CCATCTTTCA GAGTGGGATG ATCTTTCTAA 002800
002801 CAAAGAAACC CACACAGGAA TTTGGTGTGT GTGTGCGTGT GTGTATTACC TTTCAGGATG GAAGCCGGTG GGGTGTGGAG 002880
002881 CGAGGGGCTG GCATGGTTGG CCTCGCCCAG CTCCTGTACC CTGTGTGTGC CTAGAGCATG CACCTGCTCC CTCTGCTGGG 002960
002961 CTGAGACTCA GAGGACACTG GGCAGGTGGT GGGGGGTAGG AGGGTCGTGG CTGTGTTGGG TGGGGCCACA TCAGGTGTGT 003040
003041 GGCACAGAGG GGGAGGGGGA GGGGGAGTGG CAGTGTGTTC CACCCAGCAG TCCCTGTGTT TGACCTCTTC GTACACTCTC 003120
003121 TGTTGTATTA GCTCTCAGAA TGAAAACGAG ATACTTTTCC CCAATCTATG TACGTTGTTC TTAAGAATGT ACACTTGGCC 003200
003201 AGGTGCAGTG GCTCACGCCT GTAATCCCAG CACTTTGGGA GGCCAATGTG GGTGGATCAC CTGAGGTCAG GAGTTCAAGA 003280
003281 CCAGCCTGGC CAACATGGCG AAACCCCATC TCTACTAAAA ATACAAAAAT CACCTGGGTG TGGTGGTGGG CACCTGTAAT 003360
003361 CCCAGCTACT AGGGAGACTG AGGCAGGAGA ATTGCTTGAA CCCAGGAGGT GGAGGTTGCA GTGAGCCGAG ACCGCGCCAC 003440
003441 TGCACTCCAG CCTGGGCAAC AAGAACGAAA CTCTGTCTCC CAAAG
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