Lnc-SCYL1-1:3

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Same as ENST00000544868.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000544868.1

Source

Gencode19

Same with

lnc-SCYL1-1:3,NONHSAT022140

Classification

intergenic

Length

4585 nt

Genomic location

chr11+:65266516..65271100

Exon number

1

Exons

65266516..65271100

Genome context

Sequence
000001 AGGCATTGAG GCAGCCAGCG CAGGGGCTTC TGCTGAGGGG GCAGGCGGAG CTTGAGGAAA CCGCAGATAA GTTTTTTTCT 000080
000081 CTTTGAAAGA TAGAGATTAA TACAACTACT TAAAAAATAT AGTCAATAGG TTACTAAGAT ATTGCTTAGC GTTAAGTTTT 000160
000161 TAACGTAATT TTAATAGCTT AAGATTTTAA GAGAAAATAT GAAGACTTAG AAGAGTAGCA TGAGGAAGGA AAAGATAAAA 000240
000241 GGTTTCTAAA ACATGACGGA GGTTGAGATG AAGCTTCTTC ATGGAGTAAA AAATGTATTT AAAAGAAAAT TGAGAGAAAG 000320
000321 GACTACAGAG CCCCGAATTA ATACCAATAG AAGGGCAATG CTTTTAGATT AAAATGAAGG TGACTTAAAC AGCTTAAAGT 000400
000401 TTAGTTTAAA AGTTGTAGGT GATTAAAATA ATTTGAAGGC GATCTTTTAA AAAGAGATTA AACCGAAGGT GATTAAAAGA 000480
000481 CCTTGAAATC CATGACGCAG GGAGAATTGC GTCATTTAAA GCCTAGTTAA CGCATTTACT AAACGCAGAC GAAAATGGAA 000560
000561 AGATTAATTG GGAGTGGTAG GATGAAACAA TTTGGAGAAG ATAGAAGTTT GAAGTGGAAA ACTGGAAGAC AGAAGTACGG 000640
000641 GAAGGCGAAG AAAAGAATAG AGAAGATAGG GAAATTAGAA GATAAAAACA TACTTTTAGA AGAAAAAAGA TAAATTTAAA 000720
000721 CCTGAAAAGT AGGAAGCAGA AGAAAAAAGA CAAGCTAGGA AACAAAAAGC TAAGGGCAAA ATGTACAAAC TTAGAAGAAA 000800
000801 ATTGGAAGAT AGAAACAAGA TAGAAAATGA AAATATTGTC AAGAGTTTCA GATAGAAAAT GAAAAACAAG CTAAGACAAG 000880
000881 TATTGGAGAA GTATAGAAGA TAGAAAAATA TAAAGCCAAA AATTGGATAA AATAGCACTG AAAAAATGAG GAAATTATTG 000960
000961 GTAACCAATT TATTTTAAAA GCCCATCAAT TTAATTTCTG GTGGTGCAGA AGTTAGAAGG TAAAGCTTGA GAAGATGAGG 001040
001041 GTGTTTACGT AGACCAGAAC CAATTTAGAA GAATACTTGA AGCTAGAAGG GGAAGTTGGT TAAAAATCAC ATCAAAAAGC 001120
001121 TACTAAAAGG ACTGGTGTAA TTTAAAAAAA ACTAAGGCAG AAGGCTTTTG GAAGAGTTAG AAGAATTTGG AAGGCCTTAA 001200
001201 ATATAGTAGC TTAGTTTGAA AAATGTGAAG GACTTTCGTA ACGGAAGTAA TTCAAGATCA AGAGTAATTA CCAACTTAAT 001280
001281 GTTTTTGCAT TGGACTTTGA GTTAAGATTA TTTTTTAAAT CCTGAGGACT AGCATTAATT GACAGCTGAC CCAGGTGCTA 001360
001361 CACAGAAGTG GATTCAGTGA ATCTAGGAAG ACAGCAGCAG ACAGGATTCC AGGAACCAGT GTTTGATGAA GCTAGGACTG 001440
001441 AGGAGCAAGC GAGCAAGCAG CAGTTCGTGG TGAAGATAGG AAAAGAGTCC AGGAGCCAGT GCGATTTGGT GAAGGAAGCT 001520
001521 AGGAAGAAGG AAGGAGCGCT AACGATTTGG TGGTGAAGCT AGGAAAAAGG ATTCCAGGAA GGAGCGAGTG CAATTTGGTG 001600
001601 ATGAAGGTAG CAGGCGGCTT GGCTTGGCAA CCACACGGAG GAGGCGAGCA GGCGTTGTGC GTAGAGGATC CTAGACCAGC 001680
001681 ATGCCAGTGT GCCAAGGCCA CAGGGAAAGC GAGTGGTTGG TAAAAATCCG TGAGGTCGGC AATATGTTGT TTTTCTGGAA 001760
001761 CTTACTTATG GTAACCTTTT ATTTATTTTC TAATATAATG GGGGAGTTTC GTACTGAGGT GTAAAGGGAT TTATATGGGG 001840
001841 ACGTAGGCCG ATTTCCGGGT GTTGTAGGTT TCTCTTTTTC AGGCTTATAC TCATGAATCT TGTCTGAAGC TTTTGAGGGC 001920
001921 AGACTGCCAA GTCCTGGAGA AATAGTAGAT GGCAAGTTTG TGGGTTTTTT TTTTTTACAC GAATTTGAGG AAAACCAAAT 002000
002001 GAATTTGATA GCCAAATTGA GACAATTTCA GCAAATCTGT AAGCAGTTTG TATGTTTAGT TGGGGTAATG AAGTATTTCA 002080
002081 GTTTTGTGAA TAGATGACCT GTTTTTACTT CCTCACCCTG AATTCGTTTT GTAAATGTAG AGTTTGGATG TGTAACTGAG 002160
002161 GCGGGGGGGA GTTTTCAGTA TTTTTTTTTG TGGGGGTGGG GGCAAAATAT GTTTTCAGTT CTTTTTCCCT TAGGTCTGTC 002240
002241 TAGAATCCTA AAGGCAAATG ACTCAAGGTG TAACAGAAAA CAAGAAAATC CAATATCAGG ATAATCAGAC CACCACAGGT 002320
002321 TTACAGTTTA TAGAAACTAG AGCAGTTCTC ACGTTGAGGT CTGTGGAAGA GATGTCCATT GGAGAAATGG CTGGTAGTTA 002400
002401 CTCTTTTTTC CCCCCACCCC CTTAATCAGA CTTTAAAAGT GCTTAACCCC TTAAACTTGT TATTTTTTAC TTGAAGCATT 002480
002481 TTGGGATGGT CTTAACAGGG AAGAGAGAGG GTGGGGGAGA AAATGTTTTT TTCTAAGATT TTCCACAGAT GCTATAGTAC 002560
002561 TATTGACAAA CTGGGTTAGA GAAGGAGTGT ACCGCTGTGC TGTTGGCACG AACACCTTCA GGGACTGGAG CTGCTTTTAT 002640
002641 CCTTGGAAGA GTATTCCCAG TTGAAGCTGA AAAGTACAGC ACAGTGCAGC TTTGGTTCAT ATTCAGTCAT CTCAGGAGAA 002720
002721 CTTCAGAAGA GCTTGAGTAG GCCAAATGTT GAAGTTAAGT TTTCCAATAA TGTGACTTCT TAAAAGTTTT ATTAAAGGGG 002800
002801 AGGGGCAAAT ATTGGCAATT AGTTGGCAGT GGCCTGTTAC GGTTGGGATT GGTGGGGTGG GTTTAGGTAA TTGTTTAGTT 002880
002881 TATGATTGCA GATAAACTCA TGCCAGAGAA CTTAAAGTCT TAGAATGGAA AAAGTAAAGA AATATCAACT TCCAAGTTGG 002960
002961 CAAGTAACTC CCAATGATTT AGTTTTTTTC CCCCCAGTTT GAATTGGGAA GCTGGGGGAA GTTAAATATG AGCCACTGGG 003040
003041 TGTACCAGTG CATTAATTTG GGCAAGGAAA GTGTCATAAT TTGATACTGT ATCTGTTTTC CTTCAAAGTA TAGAGCTTTT 003120
003121 GGGGAAGGAA AGTATTGAAC TGGGGGTTGG TCTGGCCTAC TGGGCTGACA TTAACTACAA TTATGGGAAA TGCAAAAGTT 003200
003201 GTTTGGATAT GGTAGTGTGT GGTTCTCTTT TGGAATTTTT TTCAGGTGAT TTAATAATAA TTTAAAACTA CTATAGAAAC 003280
003281 TGCAGAGCAA AGGAAGTGGC TTAATGATCC TGAAGGGATT TCTTCTGATG GTAGCTTTTG TATTATCAAG TAAGATTCTA 003360
003361 TTTTCAGTTG TGTGTAAGCA AGTTTTTTTT TAGTGTAGGA GAAATACTTT TCCATTGTTT AACTGCAAAA CAAGATGTTA 003440
003441 AGGTATGCTT CAAAAATTTT GTAAATTGTT TATTTTAAAC TTATCTGTTT GTAAATTGTA ACTGATTAAG AATTGTGATA 003520
003521 GTTCAGCTTG AATGTCTCTT AGAGGGTGGG CTTTTGTTGA TGAGGGAGGG GAAACTTTTT TTTTTTCTAT AGACTTTTTT 003600
003601 CAGATAACAT CTTCTGAGTC ATAACCAGCC TGGCAGTATG ATGGCCTAGA TGCAGAGAAA ACAGCTCCTT GGTGAATTGA 003680
003681 TAAGTAAAGG CAGAAAAGAT TATATGTCAT ACCTCCATTG GGGAATAAGC ATAACCCTGA GATTCTTACT ACTGATGAGA 003760
003761 ACATTATCTG CATATGCCAA AAAATTTTAA GCAAATGAAA GCTACCAATT TAAAGTTACG GAATCTACCA TTTTAAAGT