LINC01538

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Annotation

Name

Approved symbol: LINC01538

Approved name: long intergenic non-protein coding RNA 1538

HGNC ID: HGNC:51306

Alias symbols: TCONS_00026184; RP11-909B2.1

RefSeq ID: NR_033983

Characteristics

Please input characteristics information here.

Expression

Top 42 long non-coding RNAs (q<0.001) differentially expressed in HHT telangiectasia[1].

Regulation

Please input regulation information here.

Function

Act as competing endogenous in colorectal cancer, can act as potential biomarker for CRC diagnosis and prognosis.[2]

Disease

hereditary haemorrhagic telangiectasia(HHT)[1]

colorectal cancer(CRC)[2]

Evolution

Please input evolution information here.

Labs working on this lncRNA

  • Department of Clinical Genetics, Odense University Hospital, Odense, Denmark; Otorhinolaryngology, Institute of Clinical Research, University of Southern Denmark, Odense, Denmark.
  • Department of Medical Biochemistry and Molecular Biology, Faculty of Medicine, Ain Shams University, Abbassia, Cairo, Egypt.
  • Department of General Surgery, Military Medical Academy, Cairo, Egypt.

References

  1. 1.0 1.1 Torring PM, Larsen MJ, Kjeldsen AD, et al. Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia[J]. PLoS One, 2014, 9: e90272.
  2. 2.0 2.1 Samir N, Matboli M, El-Tayeb H, et al. Competing endogenous RNA network crosstalk reveals novel molecular markers in colorectal cancer[J]. J Cell Biochem, 2018, 119: 6869-6881.

Sequence

>NR_033983.1 Homo sapiens long intergenic non-protein coding RNA 1538 (LINC01538), long non-coding RNA

000001 GGGATGCCCC GCAGGCCTGG ACTGATCCAC CAGGAGAACT TCAGTGCATC ATGGGTCCTG CTATTGCTCA TCCTCTTCCC 000080
000081 TGGAAATGTG CGGTTTCACA GGATGGTAAA CATCTTTCCC TGGAACAGAG CCTTGAGGAT GCTATGGTGC AGTATGATGA 000160
000161 CCACCATCCC AGTCTGCCAA GGAATGAGTA ACTTCCTGCA ATTTAGGACT TTCGGCCCTA AAACCAGTAC AGTCCTGGAC 000240
000241 ACACTAAGAT TGTTGGTCAC CCTAGAAGAA TGGAGATCTG GCGGCTACCA CTCACATATA CTCGTAGAAC ATTGATTGCA 000320
000321 AGGTAACTTA CTGGCTGAAG CAGGTGATGC ATTGCTTCGG TGGGGCTGAT GTCGAAAACC TTCAGCTTCC CAAGACAACA 000400
000401 CTGATCAGGC CTCCAGGAGC ATTTCTCCTG CTCAGTGTCA CAGTGCCACT GCAGAGCGCA ATTCCTGGGG CACGTCGGAC 000480
000481 ATTCAGTAAA TACGTTTATT GAATGAATAA AACATAACAC AGTAAGTAAT TCATCTTAAA GTCAACCATT TACATTACTT 000560
000561 TTTATCCCTG AATACCCTTC CTCTACCTGT CAATTCAGCA GTCCAAGGGA AAAACCAGCT TGGTCAACAT TAAATTTGGA 000640
000641 GCTCCCACAT CATATATTTT CATAGAACTA AACTAAGACA TAGTTTAAAG AGAAAATGTT TCACTCCTCA CGTGACCATG 000720
000721 TTCTCTTTGG ACTGGCTTTT CCCCTTCCAT TCCATATCTC TAAGTCCAGT TTATCCTTTG AGTCCTGACT CACTCAAGCT 000800
000801 TCTCCCCACT TCCTTCCTTG ACCACTTGTT AAGTGTTTGC ACCAGTAGTC TAGAAGTATA AAGGCATACA CCTCATTATC 000880
000881 ACTACACACT GTTTCATAGG TAAGTCTTAA TTTCAAATTA GTTCCTAACT CCTTGTTGAC AATGACTATG ACCAAGACGT 000960
000961 CAATCCTCCT TTAGGGTCTA AAACAGTACT GTGCATGTCA GAGGCATTCA TTATATGCTT GTGAATTGAC CAGAATAAAT 001040
001041 GACCGAATTG AAGTCTGATT TTGGTCAATT CACCAGACAA AGGGCCACAG AAGCATTGCA TCCTTTCATG ACAGAATTAG 001120
001121 GGCATGATTC CATTTCTATA TGAAATACTA GCTGTGTGTT GTTATTAAAA TTATTTTCTG GCCCCACTGA GAGTTGAAAG 001200
001201 AAAAGTTGAA ATTTAAAGGA TTCCTTCTAT TCATCATTTT TAAGAAATTT CATTTTTAGT TATGAGGCAG TGTAAGGCAT 001280
001281 ATTACCATTT TATTTGGACA CTTATTTAGA CCAGATTGCA AATTTTCTGT TAATTGAGTG CTGAATTGGC CAACACACCA 001360
001361 TTGTAGATGT ACTCCATAGC TTCTGCACAT GGAATTTATT ACAGACTTTT CATCCACATC TGCTCCTTTA CTTTGCTTAA 001440
001441 TATACTATAG TATTTCTCTT AGATACAGGG GAAGACAAAG AATATCAAAT GACAAGTGAA GAAAAATTAA CTTAGAATTA 001520
001521 TTCACAGTTA AATTGTATCT ATACTCAGGT TATCTAATAA AATATTAAAT AAACTATGTA TCTTTTTTGT TGTCCTGTTA 001600
001601 TATACTTTCC ATGTTTCTCA TTACACAAAT ACACATTTAG AAAGCTGAAA ATATGTAGAT GAGCAAATAC GAGGTTACCT 001680
001681 AAAATCCTAT CATCCAGAGA TGATAACTAT TGACATTCTG CTATATATAC TTCTAAACAT TTTCTTGTAA AACATAATTT 001760
001761 TTAAATAGAT TATATTCGTA TTTTTGAGGA AAATATTTTT CAGTTAACAA GTTGCTATTT CAAAATTAAC ACTGTAAATT 001840
001841 CCTTTCTATG ACAGTAAATA CACATGTATA TTTCATGTGA AATAGTTGTA GCAACTTTTA CTGTATAAAC CCATGTAACA 001920
001921 TATTTAGCAA ATCAATACAT ATTGTAGGAA ACTTAGTTTC CAATTTTCAA TATGTTAAAA TTTTGACAAG AATATTTTTG 002000
002001 TGTAAACATT TTTATAAGTA TATAATGCTT CCTGAGGATA AATTCTAAAA AGAGGTCTTA CTAAGTCAAT ATATATTTTT 002080
002081 TCCTATAATT TTGACATGAT TTGCGAATTT GCCCTTCAAA AAACTTATAC CCATTTATAC TCTGTTTCAC CCTTCCTAAA 002160
002161 AAGTACTAGT TATCATCCTT CACTTTTCAT GTTTAGAATC GGTTAGGTGA AAAATAGCAT TTCCATTTAC TATTTTTTAT 002240
002241 TATTTTCAAC TACTGTTGAG GTTAAATATC TTTCTATGTG GTTTTGGGCC AATTTTATTT TTCTACTAGA ATGATAATCT 002320
002321 TTTATTGGTT TTTCAGACTA TTACCTATAT TCCTGAGTCT GACATATCAA AGTTTTTAAT CCAATAAATA AAATATCATT 002400
002401 TTAATAAAAA AAAAAAAA