LINC00466
Contents
Annotated Information
Approved Symbol
LINC00466
Approved Name
long intergenic non-protein coding RNA 466
Previous Symbols
_
Synonyms
_
Chromosome
1p31.3
RefSeq ID
NR_038252
OMIM ID
_
Ensembl ID
ENSG00000224209
pubmed IDs
12477932
Sequence
>gi|917737201|ref|NR_038252.2| Homo sapiens long intergenic non-protein coding RNA 466 (LINC00466), long non-coding RNA
000001 GGAAAGGCCG AGCGCCACCC GCCCCGGGAG TCTCCAGAGC AGCGCGCGGG GCAGACCTCC TCGGGTCCTC CGGCGCTTCG 000080
000081 GTCTCCGGAG ACGCCCGGCC TCCTGAAGGG TTCGGCTTGT CCTCCTCTGG CGCTCAGCTC CCTCTGGCGG CCGGGCTGGC 000160
000161 AGGACCTCAG CGCCCAGCCC TTCCGTCTTG TTACGTCCAG GGTCTCACTC TGTGTCTCAG GCTGGAGTAC AGTGGTGCAA 000240
000241 TTGTAGATGG CTGCAGCCCT CGACCTCCTG GGCTCAAGTG ATCCTCCTGC CTTAGCCTCT CGAGTAGCTG GGAGTACAGA 000320
000321 TGCACACCAC CACACCCAGC CTAGAATGAA GAAACCTGCA GTTGGGAAGC ATGAATTTAC CACCTATTAA GGCACTGGTT 000400
000401 TACTGAGACA ATTCAAAACA CACATTCATT TTGTGTGCTT ATGAAATATA TCCCAAGATC CCCTTTTATT TTTCAGAATT 000480
000481 GTGGCTTGCA TTGTAAGAGG AGCCTGTGAA TTCAGAGGCA AGTCTGCTGA GGACCGAATG TTCCTGTCCA TAAAAACAGA 000560
000561 AGTCTGGCCT GGGCTCCTCT CTTGGGTGAA TTTGCAATGC CAGATCCTCT CTATCAGTTT GGTTTTGTTT CTTGTATCTC 000640
000641 TGGGAAGGCA GGCAGACAGC ACGGTCACCT GTGAATGCAG CTACAATTGG CTTAGCTGCC TCACTGATAA ATGTGCCCCC 000720
000721 AGTAAGCTAC AAAGGGATTA CCAGCGTTCT CAGCAGCTAA AGGAACTGGT GAAGATTTCC CCAGCAAAAA GTAGAAGCTC 000800
000801 AGTGTTTCAT AGATGAAGAC TGGGGAGATT GCAAAAGACC CATCCAGAGT CTCACTTTGT CGCCCAGGCT GGAGTACAGT 000880
000881 GGTGCGATCT TGGCTCTCTG CAACCTCTGC CTCCCAGGTT CAAGTAATTC TCCTGCCTCA GCCTCCCGAG TAGCTGGTAC 000960
000961 TACAGGCACA CATTTGTAGA GATGGTGTTT CCCCATGTCA TCCAGGCTGG TCTGGAACTC CTGGGATCAA GTAATCCACC 001040
001041 CGCCTCGGCC TCCCAAAGTG CTGGGATTAC AGACGTGAGC CACCACGCCC TGCCAATAAA AAGATTATCT CCAGATGCTG 001120
001121 ACTAAGGTAC AGAGAGGTCA AGTAACTTGC CCAAAGTCAC ACAACTATCA AGGAGCAGAG CTGAGGTTTG ATGTCACAGA 001200
001201 GGGGTCAAGA TACAGTCATA TTTATTAAAC AGCCTACTTC ATGCTTTGAA CAGAAGAGTT TTATCAGTTT TAAATGTTTC 001280
001281 TTCATTTCTA TACCTTCTTT TATCTGAGGA GCTTAAGCCA TTTTGTAGAG GCATTAAGTA TTGCCTCAGT CTTAATATGT 001360
001361 GAGACAAGGT GTGAGGAATA TAGAGATTCA TAAAATAATC CCCATCTTCA AGGAACTCAC AGTCAGGAAG AACAGAGCCT 001440
001441 GCAACACAAA TAATTGCAAT ATAGTAGAAG TGCCAATAGG AGCTCTATGA AGGGCGTGAA ACAGGAAAGG CTACATAGAG 001520
001521 GAGATGGCAG ACACTCTGTG GATTGTGACC TGTTGGTGGG CCATGAAATC AATTTGGGGG TTTGAGAGCA TCATTCTTTT 001600
001601 AATAAAACAG AAGAGAATCA TCTGCAATAA GGAACCCATG GATGAATACC ATCTGGTCCT GGTGATTTAC TGCACAGAGT 001680
001681 CCCTCAAGTT GCTCCATACC TTTCTCCTGA GAGACTGAAG AATCTCTGTC AAGGCCGTTC TCTGCTTTGC CATAAAATGT 001760
001761 GTCCTTGGAA CAAGAATTTC CCCATTGTCT TCTTCAATAA ATACTGATTC AAAGTATTCA AAAAAAAAAA AAAA
000081 GTCTCCGGAG ACGCCCGGCC TCCTGAAGGG TTCGGCTTGT CCTCCTCTGG CGCTCAGCTC CCTCTGGCGG CCGGGCTGGC 000160
000161 AGGACCTCAG CGCCCAGCCC TTCCGTCTTG TTACGTCCAG GGTCTCACTC TGTGTCTCAG GCTGGAGTAC AGTGGTGCAA 000240
000241 TTGTAGATGG CTGCAGCCCT CGACCTCCTG GGCTCAAGTG ATCCTCCTGC CTTAGCCTCT CGAGTAGCTG GGAGTACAGA 000320
000321 TGCACACCAC CACACCCAGC CTAGAATGAA GAAACCTGCA GTTGGGAAGC ATGAATTTAC CACCTATTAA GGCACTGGTT 000400
000401 TACTGAGACA ATTCAAAACA CACATTCATT TTGTGTGCTT ATGAAATATA TCCCAAGATC CCCTTTTATT TTTCAGAATT 000480
000481 GTGGCTTGCA TTGTAAGAGG AGCCTGTGAA TTCAGAGGCA AGTCTGCTGA GGACCGAATG TTCCTGTCCA TAAAAACAGA 000560
000561 AGTCTGGCCT GGGCTCCTCT CTTGGGTGAA TTTGCAATGC CAGATCCTCT CTATCAGTTT GGTTTTGTTT CTTGTATCTC 000640
000641 TGGGAAGGCA GGCAGACAGC ACGGTCACCT GTGAATGCAG CTACAATTGG CTTAGCTGCC TCACTGATAA ATGTGCCCCC 000720
000721 AGTAAGCTAC AAAGGGATTA CCAGCGTTCT CAGCAGCTAA AGGAACTGGT GAAGATTTCC CCAGCAAAAA GTAGAAGCTC 000800
000801 AGTGTTTCAT AGATGAAGAC TGGGGAGATT GCAAAAGACC CATCCAGAGT CTCACTTTGT CGCCCAGGCT GGAGTACAGT 000880
000881 GGTGCGATCT TGGCTCTCTG CAACCTCTGC CTCCCAGGTT CAAGTAATTC TCCTGCCTCA GCCTCCCGAG TAGCTGGTAC 000960
000961 TACAGGCACA CATTTGTAGA GATGGTGTTT CCCCATGTCA TCCAGGCTGG TCTGGAACTC CTGGGATCAA GTAATCCACC 001040
001041 CGCCTCGGCC TCCCAAAGTG CTGGGATTAC AGACGTGAGC CACCACGCCC TGCCAATAAA AAGATTATCT CCAGATGCTG 001120
001121 ACTAAGGTAC AGAGAGGTCA AGTAACTTGC CCAAAGTCAC ACAACTATCA AGGAGCAGAG CTGAGGTTTG ATGTCACAGA 001200
001201 GGGGTCAAGA TACAGTCATA TTTATTAAAC AGCCTACTTC ATGCTTTGAA CAGAAGAGTT TTATCAGTTT TAAATGTTTC 001280
001281 TTCATTTCTA TACCTTCTTT TATCTGAGGA GCTTAAGCCA TTTTGTAGAG GCATTAAGTA TTGCCTCAGT CTTAATATGT 001360
001361 GAGACAAGGT GTGAGGAATA TAGAGATTCA TAAAATAATC CCCATCTTCA AGGAACTCAC AGTCAGGAAG AACAGAGCCT 001440
001441 GCAACACAAA TAATTGCAAT ATAGTAGAAG TGCCAATAGG AGCTCTATGA AGGGCGTGAA ACAGGAAAGG CTACATAGAG 001520
001521 GAGATGGCAG ACACTCTGTG GATTGTGACC TGTTGGTGGG CCATGAAATC AATTTGGGGG TTTGAGAGCA TCATTCTTTT 001600
001601 AATAAAACAG AAGAGAATCA TCTGCAATAA GGAACCCATG GATGAATACC ATCTGGTCCT GGTGATTTAC TGCACAGAGT 001680
001681 CCCTCAAGTT GCTCCATACC TTTCTCCTGA GAGACTGAAG AATCTCTGTC AAGGCCGTTC TCTGCTTTGC CATAAAATGT 001760
001761 GTCCTTGGAA CAAGAATTTC CCCATTGTCT TCTTCAATAA ATACTGATTC AAAGTATTCA AAAAAAAAAA AAAA
Predicted Small Protein
Name | LINC00466_smProtein_1523:1717 |
Length | 64 |
Molecular weight | 7714.2267 |
Aromaticity | 0.125 |
Instability index | 42.0328125 |
Isoelectric point | 6.70306396484 |
Runs | 7 |
Runs residual | 0.03921875 |
Runs probability | 0.0412849824614 |
Amino acid sequence | MADTLWIVTCWWAMKSIWGFESIILLIKQKRIICNKEPMDEYHLVLVIYCTESLKLLHTF LLRD |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEELLLLLLLEEEEEEEEHHHHHHHHHHH HLLL |
PRMN | LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLL |
PiMo | oooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiii |