ENST00000610239.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000610239.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1151 nt |
Genomic location |
chr4-:146256415..146261573 |
Exon number |
4 |
Exons |
146256415..146257271,146258353..146258465,146260117..146260236,146261513..146261573 |
Genome context |
|
Sequence |
000001 CAGAAGTGCT GAACCCTTGA CGTGCCTTAT CTTATTTGCT CCTCACAACA AATCTTATGA GATGCATCAC TACCAGAAGT 000080
000081 TGTCCAGAAA GAACTGTGAC CGTATGTTTT AATTAAATAA TTTTTCATCC AGTTTTTTTC TTTGCATATA AAGAAACAGA 000160 000161 ATCCTGACAT CTGATTGAAT TATTGGCTCT CCTGATGGTT GCACGATGGC TGCAGCAGTT CCAGATGTCC CATCGAGACA 000240 000241 CAAAAAGATC CCAGATGGAA GATGCCATCT CCTCCTATGT GCCTCTTTTT AAGAGTGCCA TGCCACTCAA ACAGCCAATG 000320 000321 GAAAGGCCCA CGTGGCGAGA GCTAAGGCTT CCTGCCAACA GGCAAGTGAG GAAGCCCAGT CAGCTGCCTG CAGTCCTGAC 000400 000401 CCATGAAGAG CCTGACTGAA AGTGAATGAG CAACCCTGAG CTAGGACAAC CCAGCAAGGC CCATCCTGAA TTCCTGCCCA 000480 000481 CAAAAACTCT GAGACAGTAA ATGTTCGTTG TTTTAAACCA CAAAGTTTTG AAGTAATAGA TTAATTAGGT AACCAATTGG 000560 000561 GACTGCAGTA TTCCTTCAGG GAACTTGAAT AGTCATTCTG TATATGGAAA TTGTACACAT CTTAAAATTG CTGGACTAAA 000640 000641 GTGAGAAGAG ACTGTCTTGA GTCAACTGGA TAAAGTGGAA AAAAAATTAA TTTGGAAATC AATAGAATTC TGGCCTTGGC 000720 000721 TTTGTCACTA AGAAACACTT ATAAGTAATT TCACTTCTCT TGAAATTATG ATCATTATCT ATAACATAAA GGAACTGAGC 000800 000801 TAAATGTTAT CTGATGCCTC TTTAGGCTCT CAAACTCCAT AGATTTATGA CATGCTTGAA ATTCACTTTG TTTCACCCTA 000880 000881 ATTCAGAGCT TTGTTTCACT AGCTCTAGAA TTAGATGCCT TGGGTTTAAA TTGCAATTCA GTCACTTATT TAAATAATTG 000960 000961 TACTTGGATG AGTGATGTTG CCATTTTAAG CCTCAGTTTC CCCATAGATT CATTGAGAAG ATCAAATAAG ATGATGCAGA 001040 001041 TAAAGCTCTT AGTTTGTGGG GACACTTAGT AAGTGCTTAA TAAATACAGG CAGTTGTGTT ATCTATGTTG TAGCAGCACA 001120 001121 TTTTGTAAAA TAAAACAAAG TTGAAATCAC A |
Predicted Small Protein
Name | ENST00000610239.1_smProtein_194:418 |
Length | 75 |
Molecular weight | 8802.0999 |
Aromaticity | 0.0675675675676 |
Instability index | 82.8054054054 |
Isoelectric point | 10.137512207 |
Runs | 11 |
Runs residual | 0.00599868160844 |
Runs probability | 0.0468195468195 |
Amino acid sequence | MVARWLQQFQMSHRDTKRSQMEDAISSYVPLFKSAMPLKQPMERPTWRELRLPANRQVRK PSQLPAVLTHEEPD |
Secondary structure | LHHHHHHHHHHLLLLLLHHHHHHHHHHHLHHHHLLLLLLLLLLLLLHHHLLLLLLLLLLL LLLLLLELLLLLLL |
PRMN | - |
PiMo | - |