ENST00000609564.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000609564.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
659 nt |
Genomic location |
chr22+:42674194..42674852 |
Exon number |
1 |
Exons |
42674194..42674852 |
Genome context |
|
Sequence |
000001 GGTGAATGAC CAGAAACAGA ACCGAAAGCT CTGTAAAGTG CTCTCAAGGT TACAAAGCAT GTTTCACAGG AGCAGTTTCA 000080
000081 TCTCACACGG GCAGCCCTCT GAGCTGGGTA GTTACTGCTT TACAGATGAG GAAACTGAGG CCCGGGAGAG GGCGGGACCT 000160 000161 CAGCAAATCA AGAAAAAACT GAGACTAGGA CCTAACGGAA GTCCAGGCTA TGAATGGCCC CCGTAGGGTT AAAAGAGCTT 000240 000241 TCTAGAAATT TCTTTGAAAA CTATTGTAAA GTGACATATT TCCTCAGGAT GTCTGTCACG CCAGCAGTGG GAGCCAACAC 000320 000321 ACCAACTCTC AGAGGCTGTT CCCCCTGCGC GGCAGATCCA GACGCTCAGC TCCCAGGCCT GGAGGCTGGC GGCTTAGCCC 000400 000401 AGGGCACAGG AGGAGGCTGC CTGGGTTTGG CGCTGACTTA CAGCAGGTGC TGAGGGAATG CTGAGGAGAG GCAAGGCTGA 000480 000481 TTCAAGAGGC CGACAACAGA GAACATTCCT AGAGCTCTCC CGCCAGCTAG GCATGGTGCT AAGTGCATTA CCTGCGTCCA 000560 000561 CTCGTAACAT CCTCACAACA CTGTGAATAC GATGACCATC CCCATGTACA GGCGTGGACG CTAAGGCTCA GAGCAATAAA 000640 000641 TAATTAGCCT GAGATCACA |
Predicted Small Protein
Name | ENST00000609564.1_smProtein_5:181 |
Length | 59 |
Molecular weight | 6414.3059 |
Aromaticity | 0.051724137931 |
Instability index | 43.9896551724 |
Isoelectric point | 11.3450317383 |
Runs | 9 |
Runs residual | 0.0014209928003 |
Runs probability | 0.0422186892775 |
Amino acid sequence | MTRNRTESSVKCSQGYKACFTGAVSSHTGSPLSWVVTALQMRKLRPGRGRDLSKSRKN |
Secondary structure | LLLLLLLLLEELLLLEEEEEELEEELLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |