ENST00000609544.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000609544.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intronic(AS) |
Length |
528 nt |
Genomic location |
chr6+:76068016..76071610 |
Exon number |
4 |
Exons |
76068016..76068343,76070383..76070435,76070529..76070632,76071568..76071610 |
Genome context |
|
Sequence |
000001 AGACCAAACT AGATTTACAC AAAGGAGAAA TGGATCTAAG TACTCTTAAA AATAGGGATA TTAAAATGGA AGGTATTTCA 000080
000081 GACATTGTTG AATCAGAATG CGTGCCCAGA GAAGATAGAG ACAGGAGAGC CCAGAGGACA GAGCAGGGTG ACTTTCCTCA 000160 000161 CAAAGAAGGC ATTAGGCTCC AGGAAGGCAT TGAGGAGGAC ACTGTAAATG GGCTGACAGT CTTTCATGAG CTCATCTGGG 000240 000241 GGCCCTTCCC GTGAAGACTG CAACATCTAT TCAAAGTGGT TATATAAAAT ATGAACAGAT TTAAGAATCG AAATCTGGGA 000320 000321 AGATCAGGAT ATTTGGCAAG GGAAATAGGT CCACTGTACT GGGTTCATTG CTTAACCGCT GGAAACAAGA GCTAGACTAC 000400 000401 CTGCTCGTGA TCCCAGGAGG CTAATGGAAC AGTGATGTAT CGCGGTTCCT GCCTCGTGAA TTTGGAAGCA GGATTCTGCT 000480 000481 CCTAGGAAAA GATGAGAATA GAGCTCCAGT CTATTCTTGC TGCAGTAA |
Predicted Small Protein
Name | ENST00000609544.1_smProtein_29:253 |
Length | 75 |
Molecular weight | 8581.4731 |
Aromaticity | 0.0540540540541 |
Instability index | 57.0851351351 |
Isoelectric point | 4.68048095703 |
Runs | 13 |
Runs residual | 0.0330257086355 |
Runs probability | 0.0453507806449 |
Amino acid sequence | MDLSTLKNRDIKMEGISDIVESECVPREDRDRRAQRTEQGDFPHKEGIRLQEGIEEDTVN GLTVFHELIWGPFP |
Secondary structure | LLLLLLLLLLEEEELLLLEEELLLLLLHHHHHHHHHHLLLLLLLLLLEEEELLEEELLLL LEEEEEEEEELLLL |
PRMN | - |
PiMo | - |