ENST00000608788.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000608788.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
820 nt |
Genomic location |
chrX-:62619284..62780903 |
Exon number |
3 |
Exons |
62619284..62619783,62652244..62652371,62780712..62780903 |
Genome context |
|
Sequence |
000001 GTGCTTCCAG CGGGTGGTGG GGGGCCTGGT GTGCTGGCAT CAAGTAAGCC GACTACCTCG GCAAAGGCTT AGGGACAAGA 000080
000081 GACCAGCAGC CTGAACTGGC TGGGGCATCC GGAAGGCTTA GATCTTGTGG CCAAGAGTTC AGACCGTGGC GAAGTGGAGA 000160 000161 GTGACATGCA GTTGGATGGC GGTGACTGCG TGGTCCTGCA ACCCTGGTTC CAGTCTGGCA AGCATTGTAG ACCTGGCTGC 000240 000241 TGAAGACTGA CGGGGCCCAG GGTCCGCTGC CCCCACCGCC ATCACCACCT CGGAACCCAG GGTAACGCTG TCAGTCTTTG 000320 000321 ATGATGTCAG AAGTGGGATC CAAAGTAGAG CTTATAATGA CACCTAGGAG TGCTGAGTGA CCAAGCAAGG TACCCACCAG 000400 000401 GCCGATTATG TCCATTGTTC TCTTGGAGCA GCTGGTCATC ATGGTAAGTT CTCTCTCAGA TTCAGAAGCT CCGCATATTT 000480 000481 GTGTTTTGAG CTCTCCAAGT TTCTATGAGC CCATTTCTAA TCCAAACTGC GTTTGGAAGT CATGCCAAAA ACTGAACTGG 000560 000561 GTCCAGAATC AAATTAGATC TGGTAATTAA GTGGCTTGGA TCCAGTTAGA GGCCTCTTAC ATCTGACTGG GTCAGAAGAA 000640 000641 AACCAGTAGT AAATGGCAAT AATGCAAGGA TAAAATTTGG CTTTCACTCT TGAACAAGAT TTTCATGTAA TATTAAAGAA 000720 000721 TAATGAATGT TTTTTTTCAA CTTTGAATAA ACTACAGGAA AAAAAAAGAA AGATACAACA AAAGATTGTT TGGAAAGCTA 000800 000801 AGTCTTCCCT CTATTAATGA |
Predicted Small Protein
Name | ENST00000608788.1_smProtein_407:589 |
Length | 61 |
Molecular weight | 6721.6915 |
Aromaticity | 0.0666666666667 |
Instability index | 61.0418333333 |
Isoelectric point | 5.50933837891 |
Runs | 9 |
Runs residual | 0.000265957446809 |
Runs probability | 0.0376651160965 |
Amino acid sequence | MSIVLLEQLVIMVSSLSDSEAPHICVLSSPSFYEPISNPNCVWKSCQKLNWVQNQIRSGN |
Secondary structure | LLEEHHHHEEEEEELLLLLLLLEEEEELLLLLLLLLLLLLHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |