ENST00000607850.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000607850.1

Source

Gencode19

Same with

lnc-C5orf32-1:2,NONHSAT104160

Classification

intergenic

Length

5951 nt

Genomic location

chr5+:139541538..139552636

Exon number

3

Exons

139541538..139547062,139547266..139547387,139552333..139552636

Genome context

Sequence
000001 TGAGACAGGG TTTTGCTCTG TTGCCCAGGC TGGAGTGCAG TGGTGTGATC ATAGCTCACT GCAGCCTCAA CCTCCTGGGC 000080
000081 TCAAGTAATC CTCCCACCTC AGCCTCTCAG CCTCACAAGT AGCTGGGACT ACAGGTGCAC ACTGCCACAC CCAGCTAATT 000160
000161 TTGGGGTTTT GGGGTTGTAT TTTTTTAGAG ATGGGGTTTC ACCATGCTGC CCAGGTGTGT CTCAATCTCC TGAGCTCAAG 000240
000241 CAATTTGCCC ACCTCAGCCT CCCAAAGTGC TGGGACTACA GGCATGAGCC ACTGTGCCCG GCCTATAACC TTTCTTAAAT 000320
000321 ACTTCGAGTG GCTTCCCATC ACACTCAGAA TAAAATTCAA ACTCAAAGGG CCTGCCAGGC TGCCTCTCCT GATCTCTTAT 000400
000401 GCCTCTTCCC CTCACTCTGC TCCAGCCACA GTGACTTCCT TGTTTCTCTA ATGCCCTAAG CTTGTTCCTC CCTCAAGTCT 000480
000481 TTCACCTGCG GTTCCCTCCA CCTGGAATGT TCTTGCCCTG GGTATACACA TGGCTCAGTT CCTCATTTGG TTCTGTCTAA 000560
000561 TGTCAGCTCC TCAGAGGCCT TCCCTGGTGG TCAAAATGAG CCCCATCCCT GCGCTCACCC TCGGTTCCCT TATCCTGTTT 000640
000641 TATTTTCTTC ATAGCACTTA TTTCTCCTTG ATATAATATT ATATCAATTG TTGACTTGCG TCCTGTCTGT CTCCCTATAA 000720
000721 GGACAGGGCT TGGCTTTTTG ATGGCTATCT CCAGTGCTTA ACACAGTGCT TGGCATATAG AAGGAAATAA TATTTGTGGA 000800
000801 ATGAATGTGT ATGGGAAACC TCTTGTAACC CTCCTGTCAT CCTTTTGGCC CACGTTTTAC TCAGCCATCA CTGTGGCAAC 000880
000881 CAGCTTGGAG CAGGTAAACG CACCGAGGCT CAGCTGCTCC ACACGGCTCT GCTCTTGCCT TCTGCTGGGG CTTCTCCCTG 000960
000961 GACTCCAGTA CTGCAAACTG GATGTCTGAG GATGTTAACC CCTTGGGAGT AACCCTGGGC CCTTGGCGGC TGGGGTTGGT 001040
001041 GGCTATGTGC TTTCTTCTCT GACACTCAGT GGACAACTAG GAGGTGCACT CTACACTGCT CCTCATCACA TCCCAGCTGG 001120
001121 GTCAAGCCCC AGCTGCCCAC AGTGGTGACC AGCTCTATAA CACACCATGG CACTGGCTTT CCCTTGTTCC TACTTCATGA 001200
001201 GTCTCCCCAG TCCCCTATTC CTGCTCCCTG GGATCATGTC CTGAATTAAC TTGCAAGCAT GCTCTTTCTC TGCTTTCTCT 001280
001281 ACCTGTAAGA AGGTAGCAGG GATAGAGAAG AGCCCAGGTT ACATTAGAAC AATATATGAA ACTTATAGAC TAGTAGGAGA 001360
001361 GACCAATACA ACAAAATTTA AATAACTACA GGTAAAGAGA TGGACTTTTC AACAGATGGT GTTGGAATAA CTGAATATCC 001440
001441 ATATGGAATG CAATGCATTT CAATCCTTAC TTCATACCAT ACTCAAAATA AATCAAAGAA CTATTAAAAA AAAAACTATA 001520
001521 AAACTTCTGG AAGAAAGAAA TTCTGCCAGG CACGGTGGCT CATGCCTGTA ATCCCAGCAC TTTGGGAAGC CGAGGTGGGT 001600
001601 GGATCACGAG GTCAGCAGTT CGAGAACAGC CTGACCAACA TGGTGAAACC CCGTCTCTAC TAAAAATACA AAAACAATTA 001680
001681 GCTGGGCATG GTGGCAGGCG CCTGTAATCC CAGTGACTTG GGAGGCTAAG GCAGGAGAAT TGCTTGAAAC CGGAAGGCAG 001760
001761 AGGTTGCAGT GAGCCGAGAT TGTGCCACTG CACTCTAGCC TGGGCAATAA GAGCAAAACT CCATCTCAAA AAAAAAAAAA 001840
001841 AGAAAGAAAG AAAGAAGAAA TTCTTCATGA TGGTGGGGTA GGCAGAGATC ATAGAAAGAA CTTACTATAA AAGGAGGAAA 001920
001921 AAGACAGCAT TAAAAAGATA AATAGGTAAG TCATACACTA GGAGAAGGTT TTGTAATACA TACTTTTGAC AAAAGATTTC 002000
002001 TATCTGGAAC ATATAAAGAA ATCTAATAAC TCAATAGTAA GACCCCAACC AAAATAAAAT ATGGGCAAAA AAAATTTAAC 002080
002081 AAATACCTCA AAAAGAAGAT ATACAAACAT CCAATAAACA CACATGAAAA GTTGTTCAAC ATTATTAGCC ATTAGGGAAA 002160
002161 TGTAAATTAA AATCACAATG AGATAACATC ACACACTCAC TAGAATGGCT AAACTTTAGG AGAATCGGTA ATAACGTGTT 002240
002241 GGTGACGATG TGGAACAACT GGAACTCTTA TATATTGCTG GCAGGAGTGT GAACTGGAAC AGTCACTTGG AAAAAAGTTT 002320
002321 GGTGGTGTCT TATAAAGTTA AACATATACT TACCAATGCC CAGCAATCTC CATTATAGGT ATGGTTGGGA TGTGATTTGT 002400
002401 CTGTGTCAAA ACTCATGTTG AAGTTTGCTT GCCAGTTCTG TCCACTGGGG AGGTAAGGCC TAGTGGGAGG TGCTTGGATC 002480
002481 ATAGGGGTGA ATCCCTTATG AAAATAGGTT GGTGCTGTTG TCCTAGTAGA GTGTTTTCTT GTTGTTGTTG TTGTTCTCAA 002560
002561 GAGACTGGAT CAATTCTCAA GGAATGTATT AGTTCCTGAG CAAGGGGTTG TAATAAAGTG AAGTTTCTCC TCCTGTTTGA 002640
002641 TCTCTCTTTG CATACGTCTG CTTCCCCTTT AACCTTTTCT GCCATGTTTT GACCCAGGAC AAAAGCCCTC ACCAGAAGCC 002720
002721 GAGTGGATGC CACTGCCACT TGAACTTCCC AGTCTGCAGA ACTGTGAGCT ACACCTTTTT ATAAATGACC CATCTCAAGT 002800
002801 ATTCTGTTAC AACACCACCA AATGGACTAA GACAAGTATT TATCCAAAGG AAATAAAAAT GTATGTCTGC ACAAAGATTA 002880
002881 GTACATGAAA AATGTCAGAG CAGCTGTATT CATAATAACC AAAAACTGGA AATATCCCAA GTATCCATCA ACAGGTGAAC 002960
002961 AGATAAATTG TGGTATATTC ATACAATGGC TTACTACTCA GTAATAAAAA GGAACAAAGT AGTGGTAAGT GCTACAACAT 003040
003041 GAATACAACT CGAAAACTTT ATACTGAAAG ATGCCAGATA GAAGCATACA TAGCATATTA TTACATTTAA ATGAAGTTCT 003120
003121 AGAACAAACA AAACTATTTT GATTGGCTGG CCTTGAAAAG GTGACATTTG AGCAAGATCT GGATGTCAAG AGGGAGCCAG 003200
003201 CTATGGCAAG ATCGATGGGG AGCATTCCAG GCAAACAGCA CTACAGGAAC AGGATCAGGA AAGAGCTTGT TGAGCTTGGA 003280
003281 AACAGTCAGC AGGCCACAGT GACTGCGTGA AGTAGGTGGG GCAGAGAATG GTGGGGGACA GGGTGGAGAG GTGGATGGGA 003360
003361 GCCAGATCAT GCCAAGCCTT ATCAGCCCTG ATAAAGTTGT GGAATTTGAT ATGAATAAAA TGCAAATCCC TCATAGTTTT 003440
003441 GTGGGGCGGA AACACATAAG CAAATAAAGG CAATTCAGGG TCATGGGTGA TATATTTGGG GAGTGTACAG GGAAAGAGGA 003520
003521 GTAGTAGGCA TTAGGGACAT CTGAGAAGGC TTCCCAGAGG AGGTGACATT TCGGCTGAGA CTGGAAGAGT AGTAGAAGAG 003600
003601 GGGAAAGGTC ATTCTGGTGG AGGGTACTGT GCCTACAGAA GCTCAGAGAC ATGTAGCCTC AGGGAACATT CAGAGACCTC 003680
003681 AGCATAATAT AAGCCTAGTT GGAGTGTTCC CAACTAGGAG AGGGAGTGGC AGGAGATCTG AGGCTGAAGA GAGTGGCTTT 003760
003761 GAATGCTTTG TCAGACTTGA TCCTGCAGGG AATGGGAAAC CCCTGCAGAA TTTATAGTCA GGAAGTATCA GGGCCAGGTT 003840
003841 GACACTTCAG ATCAAGATCT CCAGATTGGC AGGCAGAGAG CAAGGCCACT GGTTCTAGTG TGAGATAATG GGGGACTGGG 003920
003921 CCTGGGACTG AGCAGGGGTG GGCGGGGCAG GGAGTAGAGC CAAACTCTGC TAAGCAGTGA CTAGGACTCT CCCGATTGAG 004000
004001 GCAAAGCTCT CCAGATCTTG AGGCCCCAGA GGGCCATAAA TACTTTCATG CGCATCTGTT CTCTTGGAGG GCTTGTCACA 004080
004081 CCTGAAGGCT CCTAGGCCCT GGCTCCCAGG GATTCAGAAG TGATAGGTCT AGGATGAAGC CCAGGAATCT GCATACATAA 004160
004161 AAAGTGACAC TCTCCACTCT GATGCGGGTG GACTCCATAC CTTCCAGGCT GGGGAGGGGA GGGGGCAGGA CAAGCACACT 004240
004241 CTCATCTGGA CTGTGGCTGA AGCAGCTCAG AGAATCGAAG GTAGCATCTA AAATAAGGAC CTGGATGCAC TGGGAACAAA 004320
004321 GGTAGTGTGT GTCTCCACTG CTGCAGCTAA AGAATTGCAG TGGAGTGGCC CTGGTCATCA TGCAGAAAAA TGACTCCTGA 004400
004401 TCACCAGTCC AAGGAGCCAC AGAAATAAGA GATGGGGCCA TGATCGGACC ATAGATCTGT CTTTTAACCT GTACCTTCTC 004480
004481 CTAGGGTGCA GACAGGGAGG CAGGAAGGGG ATTACTGGAG GCTGCAGTAA ACTAGAGAAC AAGCTCTGTG CAAAGGAAGC 004560
004561 CTCTCTTACC ATTCAGCATC TCAATGAATT AACCCTCACA ACAGCTCTAT GTGGTTGGTC CTATTATTAT TCCCATTTCT 004640
004641 TAGATGGGGA AACTGAGACT CAAAAAGGTG GAGTAAGTAG TGCTGGGTCC CAAGGTGAGG ACATAGGGGA ACCATGGCTG 004720
004721 GAACACAGGC CTCTGGACAC TCCGAATCAT AGCATTGCCC TGTGTCCCCT TCAGTGGGAA AAGTCACTTC ATCTCTTAAT 004800
004801 CTTAAATGAT CTTCCAAGCA AGAGGAGGGG AGAGGAGGAG TATAAGCTTT CTTTGTCCCA TCTTTTTCAG AAGGTATCTA 004880
004881 AGTCCTTCCT GTGTGTGTCT TCCAAAGATA CAGTACCAGG ACCTAGAGAG GCTGAGATTT AGAGCCTCAT GGTGCAAACT 004960
004961 CAATTGTAGG GTCCTAGCCA GGACTACTTG CCTGTATCTT CTAAGAATCT CACAACAGTG CCACATGCCT CAGCTTTATC 005040
005041 CAAGCAACAG AAGGAGGTGG TGGAGGTGGT GATGGCAGCA GCAGCAGCAG CAGCAGCAGT GGCAGCAAAT CTGTCCCCAG 005120
005121 TGCACTACAG TACTGTTTTG CTATGATGAA ATACACATGG CATATGGCTA CAAAGTTACT ATCTTGAGAG TGGATAGAAA 005200
005201 TGGGATTTTT CATGTGCCAG ATTTCACTTC CCTTTCTGAA ACAATTCTTG TAGTAAACAG AGGTTTTCTG ATCTTGCTAA 005280
005281 GATCAAGAGG ATGGGAATTC CTTTACACTT TTAAAGTAAG ACCACTGTCT TGTAGAGTTT CAGTCTGTTG ATGGTGCAAA 005360
005361 TGTTTTTTAA ACATGGACGC TATTCTGTGT TCCTCCCTCT TTCCTTCCAA AGGCTACGAC ACAAAGAGGA GCTGCTAACA 005440
005441 CCAGATGACC AACTCCTTTC CAGTTACGGA CCATCCCGGT GATGAGACCT CCATATGTTG TCTGATGGCC GCAGTTCCTT 005520
005521 GGCAAAGAAG CGTGGCCTGT CAGCCCAGCA TCAGATGGTT CCATGCCAAC CTCCTCCATG GCTAGGTGTT GGAGCGCCCC 005600
005601 AGCTGCTGCC TCCCTGGTAG CTTTCATTAA AGGACTTTGC TTTTTTGGAA TGGAAACCCA CACTGCTGTT GTGAAGACAC 005680
005681 CTGATGAAAC TCCAGCAACT TCTACATCTG GCCTGCTGCT TAGTCCTGGG ACCTGAGGTC AAAATCTTAG AAAAGAGCCA 005760
005761 TGTGAGATGC ATTCCCTGGC CTCATCTCTG TTCTTGGATG CTGTCAGCAA CACTCCTTGA GTTTTTACCC ACATAATAAC 005840
005841 ACTTTCCTCA GCATGGATGT GGAGGTGGGG GTGAGGAATG TTCTATTTTT CCTTCGATGG TTACGCCCTC ACCCTACCAA 005920
005921 CTCAGTAAAA GGGGAGTGGT CAGGGAGCGT A
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Predicted Small Protein

Name ENST00000607850.1_smProtein_4805:5071
Length 89
Molecular weight 10875.819
Aromaticity 0.147727272727
Instability index 92.8920454545
Isoelectric point 10.8104858398
Runs 13
Runs residual 0.0163636363636
Runs probability 0.0360360360361
Amino acid sequence MIFQARGGERRSISFLCPIFFRRYLSPSCVCLPKIQYQDLERLRFRASWCKLNCRVLART
TCLYLLRISQQCHMPQLYPSNRRRWWRW
Secondary structure LEEELLLLLLLEEEELLHHHHHHLLLLLLEELLLLLHHHHHHHHHHHHHHHLLHHHHHHH
HHHHHHHHHHHHLLLLLLLLLLLLLLLL
PRMN -
PiMo -