ENST00000607309.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000607309.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
666 nt |
Genomic location |
chr13-:88079455..88099490 |
Exon number |
4 |
Exons |
88079455..88079802,88080353..88080410,88097266..88097385,88099351..88099490 |
Genome context |
|
Sequence |
000001 AGCTGATCAG GAGGAGAAGT TCATACTCCT TGAGCTGGAT CTATCTGCAC ATGCACCTGG CCCAGGAAGC TGAAATGGGA 000080
000081 GATCTGATGA GCAGTGGAGG ACTGAACCAA AGCCCTTGGC TTTTGCTCCA TACCAGTCAG AGTCTCATCA GGATATCATG 000160 000161 TTGCATTGAG TAGTCATGTC TCCACAGGCT TTTCTTGGCT GCGACTCTTA CTCACGTTTT CCTTGGTTTT GCCCACCTTA 000240 000241 CAGTTTACAG TAGTGGTCAG CCGTTCTGGA CATACACATG GGCAGAAGAT GTAGCCGCCT TGTGTGAAAA TTTGAGAGCT 000320 000321 CTCTACTCCA TCTTCCGCTA GTATAACCCT CATTGGCTGG AATCATAATG GTATCTGCAT CTGGAACTGG CCACTAGTAT 000400 000401 AACACCTACA AAATGCACAA CGGCCTTCAG ACCATATGAA AAGTCTACAG GGTGAGAATC TGAAAATCCA GCAATGAGGA 000480 000481 GAAAAAAGTT ATCTCCCATT AAGAACACTT TCCAGAAGCT ACACAATTCC AGTTATTGAT TCATCCCATT TACTAGAACC 000560 000561 TGTTCATCTG GCTATGCCCA AAACCAAGGG AAACTGAAAT AGTGGTTACC ATATTCTGTA ACTCAGCCTA GCCTAGCTTC 000640 000641 AGAAGTTTTA ATAAAGAAAA TAAAAT |
Predicted Small Protein
Name | ENST00000607309.1_smProtein_50:172 |
Length | 41 |
Molecular weight | 4401.0515 |
Aromaticity | 0.025 |
Instability index | 103.27 |
Isoelectric point | 4.96649169922 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0463320463321 |
Amino acid sequence | MHLAQEAEMGDLMSSGGLNQSPWLLLHTSQSLIRISCCIE |
Secondary structure | LLHHHHHHHHHHHLLLLLLLLHHHHHHLLLLEEEEEEEEL |
PRMN | - |
PiMo | - |