ENST00000607309.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000607309.1

Source

Gencode19

Same with

,

Classification

intergenic

Length

666 nt

Genomic location

chr13-:88079455..88099490

Exon number

4

Exons

88079455..88079802,88080353..88080410,88097266..88097385,88099351..88099490

Genome context

Sequence
000001 AGCTGATCAG GAGGAGAAGT TCATACTCCT TGAGCTGGAT CTATCTGCAC ATGCACCTGG CCCAGGAAGC TGAAATGGGA 000080
000081 GATCTGATGA GCAGTGGAGG ACTGAACCAA AGCCCTTGGC TTTTGCTCCA TACCAGTCAG AGTCTCATCA GGATATCATG 000160
000161 TTGCATTGAG TAGTCATGTC TCCACAGGCT TTTCTTGGCT GCGACTCTTA CTCACGTTTT CCTTGGTTTT GCCCACCTTA 000240
000241 CAGTTTACAG TAGTGGTCAG CCGTTCTGGA CATACACATG GGCAGAAGAT GTAGCCGCCT TGTGTGAAAA TTTGAGAGCT 000320
000321 CTCTACTCCA TCTTCCGCTA GTATAACCCT CATTGGCTGG AATCATAATG GTATCTGCAT CTGGAACTGG CCACTAGTAT 000400
000401 AACACCTACA AAATGCACAA CGGCCTTCAG ACCATATGAA AAGTCTACAG GGTGAGAATC TGAAAATCCA GCAATGAGGA 000480
000481 GAAAAAAGTT ATCTCCCATT AAGAACACTT TCCAGAAGCT ACACAATTCC AGTTATTGAT TCATCCCATT TACTAGAACC 000560
000561 TGTTCATCTG GCTATGCCCA AAACCAAGGG AAACTGAAAT AGTGGTTACC ATATTCTGTA ACTCAGCCTA GCCTAGCTTC 000640
000641 AGAAGTTTTA ATAAAGAAAA TAAAAT
[back to top]

Predicted Small Protein

Name ENST00000607309.1_smProtein_50:172
Length 41
Molecular weight 4401.0515
Aromaticity 0.025
Instability index 103.27
Isoelectric point 4.96649169922
Runs 7
Runs residual 0.00302419354839
Runs probability 0.0463320463321
Amino acid sequence MHLAQEAEMGDLMSSGGLNQSPWLLLHTSQSLIRISCCIE
Secondary structure LLHHHHHHHHHHHLLLLLLLLHHHHHHLLLLEEEEEEEEL
PRMN -
PiMo -