ENST00000607269.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000607269.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
antisense |
Length |
3491 nt |
Genomic location |
chr13+:79170264..79173754 |
Exon number |
1 |
Exons |
79170264..79173754 |
Genome context |
|
Sequence |
000001 GCACGCGCGC CGGGTGCCCC GGCCTAAGGC CGTTGACCTC GGGTTCTCCC CGGCACAGTC GAATCCACGC CAGGGCCCTC 000080
000081 AGGCCGGTAG CTGTCCTGCA GTCCGAGCGG AGCTGCGACC TCGGGCAGCT GGAAGCCTGT GGGCTGCTGC TTCTCCAGGC 000160 000161 AGGCGGCGGA GGGATGCAGG CAGGATGAGC GGCGGTCCCT TCGCCGCCAC CCGGAGAACC GCGGCTGGTG CCCTTGAAGG 000240 000241 CCCTGGGATG CCTGGGTTGG GTGGGTGAGT GAACGAGAAC CCTGAGTGAG TGAGGGGAGG GCGGGTCCCC TCCTGGCTTC 000320 000321 AAATTCAACC CAATCAGCTC TGCCGATGGT TTGAAACTGC ACACGCCGAC CCACCCGCCC CGAAGTCTGA AAGTTATGCC 000400 000401 CTGGAGACCT GCGAGCTGCG GAGTGCAGCT GGAGAGGGAG CTGCCCCACG AGGAGGCCTC CAGAATAACT CCCGGAGTCG 000480 000481 GAACAGCGCT GGGCTGCTGA AGTTTGCAGC CTCCGGATCC GCGCCCCGCC CTGCAGATCC ACCGGATTTC GGGGAGGGAA 000560 000561 TCGGGGGGCT GCCCGTCCTC CCGTAAAGCT GACTTGACAA CAATTACGAA AGTTTTTAAT TAGCTCCTTG TTATAATTCA 000640 000641 TTTTATTTCC AGAACTCTCC GACCATAAAT TATTCAAAGA GTAAGCCAAC CCGAGCGGGG CGGCCGCGCG CCTTCCCCAC 000720 000721 GCGCGCCGGG CTGGCTCTGG CCGCTCAGCT CACCCGATGC CCCGTGAGCC AGCCCCGCGC CAGAAGCCGC GGTGGCAGGA 000800 000801 AGGTTTGATC AAACATTAAA TAACGTAATG TTTGCGACAA GGCTTATCTC ACAAGTGGAA AAGAGGACCT CGCGAGAATT 000880 000881 AGAATTCGGC TGCTATTTTA AAAAATCAAT TAAGCTTGCG GTCTTTTTTG AAACAGCTCG AAAGGACTGC GTGGCTATCA 000960 000961 TCGTGGCGCT AAGACTGAGA TGGCAATAAC ACCGATGGCA GAACTGTACC AGTATTAATT GTCATCACCT TTATCATCCC 001040 001041 GCTGGCCACC AAGGCCGTTC GAATGGGGTG GGAAAGGCTA GTTTTAGCCA GGATCAGAAG CCCCAGTTCC AACTTCACGG 001120 001121 ACGAAAAACT GCGAAAGCCT ATCAACTTGA AAGATGAGTA GGGATACTTC ACGCAGGTGC CAGGTGCTAT CAGGAGAGGC 001200 001201 CGGGGCGGCG GGGCAGAGGC AGAGGGCAGG GATCGCTGAG TGAGTCCTGC GGGCTTGGGG CGCCCTGTTC TCTCACGTGC 001280 001281 GCTGCCACGT GTAGGAGGAA CTGGACCGAA GTAGTCTCAG TATCACAAGA AAACAAAAAT CGATACAATC ACGGCAGTGG 001360 001361 GTGCCTACAG TTTATTTATG AAACTGTAAT CGAAGTTGAG AGCAATTTCA GAACACGCAT TAAACAAAAA TTATTCAGAA 001440 001441 GTTAGTTGAT GGGTCTTGAG GACATAATTT TTTTAGACCT ACAGAAGGAA CACGACCTGG AGCTAGAACT GGGGAAAAGA 001520 001521 GGAAATTTAA GACAAATGGA TGGCATAAAT GTGGCAGATG CTTTAATGCT TATTTGTCTT TTGCTTTTCC TATTCCACCC 001600 001601 CCGCCGCCGC CTGGATTTCC TGAGAAGCTG AAATGCAAAC GGAGCCCAAT TTTCCCACTC TCTCAAACTT ATTTTGAGAT 001680 001681 TATTCTTTAA AAGAATCCGA GACACACATT TTATCATATT CACCCCAAAA CTGGTGGAGG AATCCGCTTA GAGTGAACTT 001760 001761 CTCTTCAGAA CTAGAAAACT TTGAAAGGCC AAACTATCAC TCATTGACAC CCACTTCAAT GATAGTTTGG CCTCTTCAGG 001840 001841 AGGTCCCTTT TTGTTTTTTT TTCATGGATT GACAGTTAAA GGCGTCTTAG AATAGTCTTA CTACTCCTTC AAGCCATATA 001920 001921 TAGATTCGCT TACCAGAAAG CAAAGCATTT TTTTTTGTTT TGCACAGTTT CCTACTACAT AAAATAGGAA ATTCATTTTC 002000 002001 ATGATGTTTT ATTAACATAA TACTCTTATT TTTATGTGGT AAAGGTTTTA TTTAAAGCAA ATTCTTAAAT TCTTAATACC 002080 002081 TACATTGATC ATTATTATAT AATACACATG TGTTTGCCTG CAACATTTCT GCTTGAGGCA GACTTTAAAA AAAACCCTTT 002160 002161 GTAAATCTTT TCATTTGTTC TGTCCTGTTT TTCCAACAAT GAAATCCAGT CATACTTTTC TATAAAATAA CGGTTTTTTT 002240 002241 ACAAATGCAT TTTATTTAAA ACTGATGATG TTTCAAGTCA ATAACAGCAA AAACAAATCA ACTTTTTATG GAAGAGTTCT 002320 002321 ATGTTTAAAA ATACCTCTAG TGCTTTTTTT TTTTAACATT AACAACTGTT TAAAATCGCA GCTTTTAAAA TGTACTATTC 002400 002401 TTTTTGAACA TCAAGTGTTT TCCTTCACAG ATTTGCCGGT GAAATTAAAA AGATTTGGCT AAAATAAGAT GACTTCAGAT 002480 002481 GATATAATCT CAACTCTTAA GAAACTTTGT ACATTTGGCA TCTGATCTAG TCCCAAGTCA CCAAGAAATA GAGGCTCTCT 002560 002561 AGTCACTGTG GAGCAGTAGG TGGCACACTA AATGTTTTAA AATGTATTAC CCTCCAAAGA AAAGCCATTC AGTTACTAGG 002640 002641 TGTTTTTAGG GTAGAATATC ACATCTAAAC CTCCAAATTC CTCTGTCCCT GACCCTAAAT TTAAATGTTT TTTGGGTGCC 002720 002721 TGGTTATTTA TTGGTTTTCA CCACTCTGGA TCAAGTGCTG TGGTTTAAGA GTTTCTGCAG TTAAAAAATA ATAACTTTTA 002800 002801 TAAACACAGG CAACTAATAT AGAATTCATT TTATTTAGAG CACCACTTTT CATGAGTTAT CTGAAAGTGA ATTCTGATTC 002880 002881 AGCAAAAAAA TACATCATTC TCAATCTCTC CCCTTTTTGT CCCCCTTCAA CACCCTACCC TCCCCCCATT TCTTTGTGTT 002960 002961 TTCTTTTTGT TTGGTTGTTT GTTGAAAGGT TCTACCAGGA CCTGGCCCAG TATAAACACA AAAACGCACC CAAATCATAA 003040 003041 AACTGCTCTT CTTTCAGTTA TGTTTTATTT GTAAGTGTAC TGGGACACAT CCCCCTGTTG TATTTTGGCG CATAGAATTG 003120 003121 GTTCTGATAG AAGTAAGGGA GGAGAAAGGT AAAAGAGAAA AAACATAACC AAGGAGAAAG CTCAGCAGAC ATACATGGAC 003200 003201 AGGTAGATCA ATCCGTGAGA CATTTCAGGA TGAACACTGG CAGTCTGTTA CCACTGTGTG AATGTGTGCA TTAAATAAAA 003280 003281 TATTTACAAT AATCTTTTTT CCTTTTTCTT TGAATACAAG AATATGACAA AAATGTTTTC AGTGGAAACA GGCAGTAGAC 003360 003361 TGTGAAATCG CACTAGCCAC AAAACGGTCT ACCAGAAAGC TAGCCCAGTT TAGTGCTCAG TTTCAAATGC ATAGAATGTT 003440 003441 TGCCCTGCAA ACAATGATAT ACAACATAAT TAAATAAATA ATGCCTAACC A |
Predicted Small Protein
Name | ENST00000607269.1_smProtein_2264:2461 |
Length | 66 |
Molecular weight | 7664.1525 |
Aromaticity | 0.153846153846 |
Instability index | 40.5770769231 |
Isoelectric point | 9.85809326172 |
Runs | 15 |
Runs residual | 0.0804807692308 |
Runs probability | 0.0504445622093 |
Amino acid sequence | MMFQVNNSKNKSTFYGRVLCLKIPLVLFFFNINNCLKSQLLKCTILFEHQVFSFTDLPVK LKRFG |
Secondary structure | LEEEEELLLLLLEEEEEEEEEELLEEEEEEELLHHHHHHHHLLEEEEELLEEEEEELLEE LLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL LLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooooooooooooooooooooo ooooo |