ENST00000607058.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000607058.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
antisense |
Length |
2553 nt |
Genomic location |
chr8-:24769678..24772230 |
Exon number |
1 |
Exons |
24769678..24772230 |
Genome context |
|
Sequence |
000001 CTCCTTGTTC TGCTCGGCCG CCTCGGTGAG CTTGGCGTAG CGGCATTTGA ACCACTCTTC GGCCTGGTGC ATATTCTGGT 000080
000081 CTGAGTGGCT TTCGAGCTGG GAGCGGATTT CCTTCAGCGC CGTCGAGATG TCTGTCTTCA GGTAGTCTTT GCGCTCCACC 000160 000161 GTGATGTGCG ATGCCTGGAT CTGGGCCAGA AGGTCGGCCA CCTCCTCCTC GTGGTTGCTC CGCAGGAAGG CCACCTCATC 000240 000241 CTGCAGCGAC TGCACCTTCT TGTCCAGCTC CACCTTGACC AGCGACGCCT CCTCGATGTC TTTGCGCAGC GCGCGGATGG 000320 000321 CCGCCTCAGT GTCGTCGCGC AACCGCGCCT CCTCCTCAAA GCGCTCCTTG AGCCGGTGGA TGTCTTCCTC CAGGTGGTCC 000400 000401 GAGTCCAGCT GCACCTGAGC CTTCTCGTGG TTCACCATCT CCAGGGTGGC GCGCAGCTCG CGGATCTCCT GGTCGTACGC 000480 000481 GTCGCCCAGC TGGGCGTGCG AGGCCTGCTT CTGCCGCAGC GCCTGGATCT CCGCCTCAAT CTCCTTATTC TGCTGCTCCA 000560 000561 GGTAGTGCAC CTTCTCTATG TAGCCGGCAA AGCGGTCGTT CAGCCCCTGC AGCTGCTCCT TCTCGTTGGA GCGGGACAGC 000640 000641 TTGTAGTCGC CGCCGGGTCC GGAGCCGCCG TTGAGCAGGG ACGAGGACTG GCTGAAGTCA AGGCTGCTCT CGGCGGAGCT 000720 000721 GAGCATGGCC GAGCTGTAAG CGAGGCGCGG GGCGAGCATG CTGCGCTTAT AGGAGGAGGA CACGGTGCTG GGCGAGCCGC 000800 000801 GGGACCACGA CTGCGAGCGG AAGCCACTGG ACGGGGAGCC GCTGACGCGG CTGAAGCTCG AGCGGGTCTC GGTTACCCGC 000880 000881 CGGTAGGCGG ACGGGTTGCC CAGCGAGTCC AACGTGTAGC TCATCTTGGA GGCCTTGGGG CGTGTGGCTG TCACAGCGTT 000960 000961 CTGCCGGCCT CGCCGCAGCC CATTTATAGC CGCGGCGCTG GTCCCGGGCC AGGGCCCCGC CCCGTGGAGG CGGCGGCCGA 001040 001041 GGAGGCGGGG ACTGCGGGCA CCGGTCGGGG AGGAGGGGAG GGGGGCGGCT GAACGGTGAT TCAGCGCCCG CTCCACGTGG 001120 001121 GCCCAGGCCG CATGGGAACC TGGACTTTTC TGCCCTGGGC CCAGCCCCTC CCCCAGGTCC CCTTTCAGTC CCAGGCTACT 001200 001201 TGTAGCCGGG CATTCGCCTT CTTTCCATTT CTCACCTCCC GATTGCGTTT CGCACCCTTG GTGCGAATAT CGCCAGCGCC 001280 001281 CTTTCTTTGT CACTGTCCCG CCGTTCAGGC AGCGCTTCCC CGACCCAGTG GTCCCCTTGT TCTTTAGCCT TCTACCCTCT 001360 001361 TATCCTCAAG GCTTTCTCTT ATTTTGCCCT TTCCCTGATA CTTTTTTCTT TACCCATCTT CTGTGCTTAA TTTCATCCCC 001440 001441 TTCTTTTTTG GCCCCTCTTC TCCTTCCTAC TCTGGCCTTT AGTCCAGTTC ACCCTGCCCT TCTCTCAGCC CCTTCCTCGG 001520 001521 AGATCCTTTT CTTCCAATCT TTCCTTCTCC CCGTCTCCTC CCTCCTTCCC CTTGCATTCC CTCTTTTCCC CTCCCCCACC 001600 001601 CTCATCTTTT CTTGCCTCCC TCCCCTTCCC CCACCCCTTG TCTTAAAGCA GCTGGAGATG AGCGCCGAGG AGCTGGGTCT 001680 001681 AGAAGACAAA ACAAAACAAA AAAAAAGACT TTGCGGAACG GTCTGCCTGA AGGCTTCGGG AAGGGGACAA AGAGAACAGG 001760 001761 CCGGGGTAGT TATTTGTATA AAAAGTGGGA TATGGCGTTT TTAACGTTTG GGGGACGTCC GCAGCTTCCG CAGGGGCAGA 001840 001841 AGGTAAGGCG CTTGTGCTCG CTATGGCGCC GGCAGCACCA AGGACAGCGC CCAGGTCGGC GAGTGGGAGG TGCAGCCACC 001920 001921 CGGGGGGCTT GTCACCCAGC CTGGCCTGTC AGGTTGGCAG GGGGCAGGGG GTTCCCTTCC CCCTCTTCTC TCCGAGTAAA 002000 002001 TACAATTTAA ACCTGCCTGT AGTGACTATC TTTGCAGGAG CGAAGCTGGA ATCACAGGCT AAGACTTCCC TGCAATGCAG 002080 002081 GGTTGGCACA ATGGACAGAT CGCAGATTTT GAAAACAACC AAAATTCATT AAAGTCAGTT AACAGAAATA TATACTTGTA 002160 002161 GCCCAGTTTG AGTTTTCTAA CATATGGTGG TATAGGAAAT GAAGAGATAC AGGGCCTGAA ATGTGAAGGT CAAATACTCC 002240 002241 TTGGAAAGGA GAATTTGAAA TCTGTTGGGA TGAAAAGTCC AGGGAAATAT AGTTTTTCTT AAGTTTGGAC ACAGACAATT 002320 002321 GCCTTGTCAT CTTTCGGTTC AGTATTCCCT ATGTGTAACT GCAATGATTG AAAAGGCATC TGAATTAACT TTAAATTGAT 002400 002401 TTAAAAGTTG CGGAACAGAG TCACCACAAC CTTGAATAAA ATCAGATGTT TTCCCTTCAT TTAAAATGTA ATATATTTTT 002480 002481 CGCTTTAGAT TTTAATGATT GATTTGGAAT AGATTTTCTA TATCATTAAA CATGTTTATG CAAACAAGAA CTC |
Predicted Small Protein
Name | ENST00000607058.1_smProtein_1862:2131 |
Length | 90 |
Molecular weight | 9347.7708 |
Aromaticity | 0.0449438202247 |
Instability index | 60.8640449438 |
Isoelectric point | 10.6168823242 |
Runs | 12 |
Runs residual | 0.00837188808107 |
Runs probability | 0.0267988576812 |
Amino acid sequence | MAPAAPRTAPRSASGRCSHPGGLSPSLACQVGRGQGVPFPLFSPSKYNLNLPVVTIFAGA KLESQAKTSLQCRVGTMDRSQILKTTKIH |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHHEELLLLLLLLLLLLLLLLLLLLLLEEEEEELL EEELLLLEEEEEEEEEELHHHHHHLLLLL |
PRMN | - |
PiMo | - |