ENST00000606367.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000606367.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
2838 nt |
Genomic location |
chr6-:31162977..31165814 |
Exon number |
1 |
Exons |
31162977..31165814 |
Genome context |
|
Sequence |
000001 AGAGTTCACT GCGAGGACTG GGATCACCCG TCACCCCGCC CTGGTCTACG GAAAATGACA AGTGTTTACT GATATAGAAA 000080
000081 CGGAATAACG GCGCTGTGGG CTGGGGTGGG CGGAGCTGCC TTCAGGCTTC TGGTCTCCAG CGGCGGGGAA CTCACACCTG 000160 000161 CCGCTGTGAA AATGCAGACC CGCGGGGCAG TAATTCCGAG TCCAGCCTGG GGCGCGATCT GGAATCTTGA CTCGCTTGAA 000240 000241 ACACCACGAC GGATTCGGAG ACAGGTGAGT AGAGAAATGA GCCTCAGCCC CTCCCACGGG CCGCCCACGG ATTCCAGGAT 000320 000321 CCGGAAACTC TTCCTGCTGC TGCGTCACCC CAGGAAGGCA GCGCCCGCCT CTGGGCAGTT CTGATGGAAA CTGGCTTCGC 000400 000401 CGCCCAGAGG AAAACCCACA ACTAAGGGGC CAAGAAAAAG CCTCCATGGT CCCGCCCTTT CAGTGAGGAT CCTAATTTAT 000480 000481 ACCCCGAGTG TGGCCCCCAT CAAAGTCTGC AGTGACAGCC GAGCGCGGTG GCTCACGTCT GTAATCCCGG CACTTTGGGA 000560 000561 GACCATGGCG GGCGGATCAC TTGAGGTCAG GAGTTCGAGA CCAGCTTGGC CAACATGGTG AAGCCCCTTC TCTACTAGAA 000640 000641 ATACAAAAAT TAGCCGGGTG TGGTCGTAGG CGCCTGTAGT CCCAGCTACT CGGAGGCTGA GGCAGAAAAA TGGCTTGAAC 000720 000721 GCGGGAGGCG GAGCTTGCAG GGAGCCGAGA TCGCGCCACT GCACTCCAGC CTGGGCGACA GAGACTCCAT CTCACACACA 000800 000801 CACAAAAAAT GTAGAGTGAC GTTCACTGAA ATGATACTAG ACCAGCGGGA GGGACCCAGA GCGCTGCGGT TCACAGAATG 000880 000881 CGGTGACAGC GCCGCCTCGC GTCCTTTACT TCAACTGCCC CAGGCAGACG TGGTCACGTG TGTTGGCCTG GAGGCTGGAA 000960 000961 TACACCGGGG TCAAATGCAG AGTGGAGAAA GGAGGGAAGG ATGGGAGGAC GTGTTGAAGA AAGACAGTAA GAGCTAGCGC 001040 001041 TATGGTTCAT ATCTGTAAAA CTAGAGTTTT CGGAGGCGAG GCAGGAGGAT CGTGTGAGAC CAGGAGTTTG AGGTCGCAGT 001120 001121 GAGCCGTGAT CACACCACTG CACTCCAGCC TGGACGACAG AGTGAGACCC TGCTTTTATA TACTTTTCAT ATTTTCTGTA 001200 001201 ATTAAGCAAG TTTTGTGTCC GGAATTGGTG GGTTCTTGAT CTCACTGACT TCAAGAATGA AACTGTGGAC CCTCGCGGTG 001280 001281 AGTGTTACAG CTCTTAAGGT GGCGCGTCTG GAGTTTGTTC CTTCTGATGT TCGGACGTGT CCGGAGTTTT TTCCTTCTGG 001360 001361 TGGGTTCGTG GTCTCGCTGG CTCAGGAGTG AAGCTACAGA GCTTTGCGGT CAGTGTTATA GCTCTTAAGG CGGCACGTCT 001440 001441 GGAGTTGTTT GTTTCTCCCG GTGGGCTTTT GGTCTTGCTG GCTTCAGGAG TGAAGCTGTA GACCTTCACA GTGAGTGTTA 001520 001521 CAGCTCATAA AAGCACTATG GACCCAAAGA GTGAGCAGTA GCAAGATTTA TTGCAGAGCA AAAGAACAAA GCTTTAGCAG 001600 001601 TGTGGAAGAG AACCCGACTG GGTTGCCACT GCTGGCTCGG GCAGCCTGCT TTTATTCTCT TATCTGGCCC CACCCACATC 001680 001681 CTGCTGATTG GTAGAGCCGA GTGGTCTGTT TTGACAGGGT GCTGATTGGT GCGTTTGCAA TCCCTGAGCT AGACACAAAG 001760 001761 GTTCTCCAAG TCCCCATCAG ATTAGTTAGA TACACAGTAT GGACACAAAG GTTCTCCAAG GCCCCACCAG AGCAGCTAGA 001840 001841 TACAGAGTGT AGATTGGTGC ATTCACAAAC CTTGAGCTAA ACACAGGGTG CTGATTGGTG TGTTTACAAA CCTTGAGCTA 001920 001921 GATACAGAGT GCCGATTGGT GTATTTACAA TCCCTGAGCT AGACATAAAG GTTCTCCAAG GCCCCACCAG AGCAGCTAGA 002000 002001 TAGAGTGTGG ATTGGTGCAC TCACAAACCC TGAGCTAGGC ACAAGGTGCT GATTGGTGTG TTTACAATCC CTGAGCTAGA 002080 002081 CATAAAGACT CTCCACGTCC CCACCAGACT CAGGAGCCCA GCTGGCTTCA CTTAGTGGAT CCCGCACCGG GGCTGCAGGT 002160 002161 GGAGCTGCCT ACCAGTCCCG CACGGTGCGC TTGCATTCCT CAGCCCTTGG GTGGTCGATG GGACTGGGCG CCGTGGAGCA 002240 002241 GGGGGTGGTG CTCGTCGAGG AGGCTCGGGC CGCACAGGAG CCCTTGGAGT GGGTGGGAGG CTTAGGCATG GCGGGCTGCA 002320 002321 GGTCCCCAGC CCTGCCCCGC GGGAAGGCAG CTAAGGCTCG GTGAGAAATC GAGCGCAGCG CTGGTGGGCT GGCACTGCTG 002400 002401 GGGGACCCAG TACACCCTCC GCAGCTGCTG GCCCGGGTGC TAAGTCCCTC ATTGCCAGGG GCCAGCAGGG CTGGCCGGCT 002480 002481 GCTCCGAGTG CGGGGCCCGC CAAGCCCACG CCCACCCGGA ACTCCAGCTG GCCGGCAAGC GCGGCACACA GCCCCGGTTC 002560 002561 CCGCTCGCGC CTCTCCCTCC ACACCTCCCC GCAAGCTGAA GGAGAGGGCT CCGGCCTTGG CCAGCCCAGA AAGGGGCTCC 002640 002641 CACAGTGCAG CGGTGGGCTG AAGGGCTCCT CAAGTGCCGC CAAAGTAGGA GCCCAGGCAG AGGAGGCGGG GAGAGCAAGC 002720 002721 GAGGGCTGTG AGGACTGCCA GCACGCTGTC ACCTCTCGGT TTTACTTTAT TTTAGGATAA AATATCTATT GTGAATTTTA 002800 002801 AAAACATGTA AAATAAAATT TTAATTAAAA AGCCTAAA |
Predicted Small Protein
Name | ENST00000606367.1_smProtein_830:1036 |
Length | 69 |
Molecular weight | 7524.4308 |
Aromaticity | 0.0294117647059 |
Instability index | 56.0205882353 |
Isoelectric point | 5.72735595703 |
Runs | 9 |
Runs residual | 0.00814785373609 |
Runs probability | 0.0490588627844 |
Amino acid sequence | MILDQREGPRALRFTECGDSAASRPLLQLPQADVVTCVGLEAGIHRGQMQSGERREGWED VLKKDSKS |
Secondary structure | LLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLEEEEEELLLLEEELLLLLLLLLLLHHH HHHHLLLL |
PRMN | - |
PiMo | - |