ENST00000603720.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000603720.1 |
Source |
Gencode19 |
Same with |
NONHSAT074017 |
Classification |
intronic(AS) |
Length |
708 nt |
Genomic location |
chr2-:121623953..121624978 |
Exon number |
2 |
Exons |
121623953..121624366,121624685..121624978 |
Genome context |
|
Sequence |
000001 GAGCGCTCGC TGGCTGGCTG GCTAACGGAA AGGCTGGCTG GACTCGGGGA TCCAGCCACA CTGCTGGCGG GCAGCATGCT 000080
000081 GTCCACCCTG CGGGTGCCTT TCTCAGACTA GGGCCCGCAT GAATTCCGCC TCCCGGGAGA AGCTGACGTC GGCATGCCTT 000160 000161 CCAGGGGCAG CGGCTGCCCT CCAGGGTCTG GAACTTGGGG GTCATGCTGC CTCCAACTCC TGACTCTGTG GCCCCAAGAG 000240 000241 GAAGAGGAAG CTGGGTGGGA TCTTAGGGGC CATGTGGACT AGGCAGCCCA CTGGGGAGTG GGCACGTGAA AAGTACTTTG 000320 000321 GGACACGGAG TTCCAATCAA ACAGAAGACT GGAACCTCAG CACCTCCAAA GCTCACGGAC CCGCTGGTGA GGGCTGCCCG 000400 000401 GACTGCTGAT TCCACTCAGC CACTCACCAC CCGCCCTGTC TGCCAGGTGC CATGTGCAAG GATGCTGCAT TTTCTGCTAA 000480 000481 TGGGGGTGGG GGATGGCAGG AGACATAATG GGGTGGGGAG GGGTCATTGC TATTGTCGTC ATCACTCTTT GTCACCCCAA 000560 000561 TGGCATTCTA TACCTTCTTT TGCATCTGAT CTCAAGGCAT CAAGAATATG AAAAACAGCT CTTCTGTCCC CAAAAGGGAG 000640 000641 ATCTTACCTT AAGCAATGGG ATTACCATTA AGTACAAGAC ATTTGACATT AAACCATTAA GCACAAGA |
Predicted Small Protein
Name | ENST00000603720.1_smProtein_461:610 |
Length | 50 |
Molecular weight | 5526.29 |
Aromaticity | 0.0816326530612 |
Instability index | 47.0693877551 |
Isoelectric point | 10.0822143555 |
Runs | 7 |
Runs residual | 0.019194704909 |
Runs probability | 0.028238322356 |
Amino acid sequence | MLHFLLMGVGDGRRHNGVGRGHCYCRHHSLSPQWHSIPSFASDLKASRI |
Secondary structure | LEEEEEELLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLHHHHLLLLLL |
PRMN | - |
PiMo | - |