ENST00000603154.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000603154.1

Source

Gencode19

Same with

,

Classification

intergenic

Length

508 nt

Genomic location

chr11-:110962656..110968081

Exon number

2

Exons

110962656..110963035,110967954..110968081

Genome context

Sequence
000001 GCACTGGGAG AACGGGGTGG GGCCTCCAGA AGTTCACGCC ATTTGCAGCG GGGAGGAGCC TGTTCCTGTG TGGCGACCTG 000080
000081 GGCTTCAATC TGTGAGGCGG GAAACCTGCT AGCAGGACTC TTGCTTTGTG GTCTCCTGTG AGAAGAACAT ACCCCAGGTA 000160
000161 GCCTCTTCTT TGAGAAGCAC AAGGAAACAC GTGGTGGTGG AACTGAACAC AACCCACAGC CTGGAGCTAA ACCCAACCTA 000240
000241 AGCCAGCCAA GCTCTTCCAA GATCACCCAA ACTCAAGTTG ACCTGTAGAT CCATGGGCAA GGAAAGAAAT GCCTGCTGTT 000320
000321 TTAAGATCTC AAGTTTTAGG TTGATTTGTT ATGCAGCATT ATTGCAGTAA AAATGAACTA ATACACTACC TAATCCCATT 000400
000401 TTTCTATTCA ACAGTTATTT GTTGGGTAGC TGATATGTGC CACACACTTA TAATACAGGC TTCAGGGATA CCATGGTTAA 000480
000481 TAAAATAAAG AGGGCAAAAG TAAATGAA
[back to top]

Predicted Small Protein

Name ENST00000603154.1_smProtein_350:487
Length 46
Molecular weight 5328.3207
Aromaticity 0.155555555556
Instability index 46.0046666667
Isoelectric point 6.79449462891
Runs 6
Runs residual 0.0289141414141
Runs probability 0.0464435023259
Amino acid sequence MQHYCSKNELIHYLIPFFYSTVICWVADMCHTLIIQASGIPWLIK
Secondary structure LLLLLLLLHHHHHHHHHHHLEEEHHHHHHHHHHHHHHLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo oooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiii