ENST00000603154.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000603154.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
508 nt |
Genomic location |
chr11-:110962656..110968081 |
Exon number |
2 |
Exons |
110962656..110963035,110967954..110968081 |
Genome context |
|
Sequence |
000001 GCACTGGGAG AACGGGGTGG GGCCTCCAGA AGTTCACGCC ATTTGCAGCG GGGAGGAGCC TGTTCCTGTG TGGCGACCTG 000080
000081 GGCTTCAATC TGTGAGGCGG GAAACCTGCT AGCAGGACTC TTGCTTTGTG GTCTCCTGTG AGAAGAACAT ACCCCAGGTA 000160 000161 GCCTCTTCTT TGAGAAGCAC AAGGAAACAC GTGGTGGTGG AACTGAACAC AACCCACAGC CTGGAGCTAA ACCCAACCTA 000240 000241 AGCCAGCCAA GCTCTTCCAA GATCACCCAA ACTCAAGTTG ACCTGTAGAT CCATGGGCAA GGAAAGAAAT GCCTGCTGTT 000320 000321 TTAAGATCTC AAGTTTTAGG TTGATTTGTT ATGCAGCATT ATTGCAGTAA AAATGAACTA ATACACTACC TAATCCCATT 000400 000401 TTTCTATTCA ACAGTTATTT GTTGGGTAGC TGATATGTGC CACACACTTA TAATACAGGC TTCAGGGATA CCATGGTTAA 000480 000481 TAAAATAAAG AGGGCAAAAG TAAATGAA |
Predicted Small Protein
Name | ENST00000603154.1_smProtein_350:487 |
Length | 46 |
Molecular weight | 5328.3207 |
Aromaticity | 0.155555555556 |
Instability index | 46.0046666667 |
Isoelectric point | 6.79449462891 |
Runs | 6 |
Runs residual | 0.0289141414141 |
Runs probability | 0.0464435023259 |
Amino acid sequence | MQHYCSKNELIHYLIPFFYSTVICWVADMCHTLIIQASGIPWLIK |
Secondary structure | LLLLLLLLHHHHHHHHHHHLEEEHHHHHHHHHHHHHHLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | oooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiii |