ENST00000602608.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000602608.1 |
Source |
Gencode19 |
Same with |
NONHSAT124586 |
Classification |
intergenic |
Length |
1517 nt |
Genomic location |
chr8-:326243..327759 |
Exon number |
1 |
Exons |
326243..327759 |
Genome context |
|
Sequence |
000001 TGCTCAGTGG GGATGATGGA GGGAAGGCGC CTCCCTCTGC GGGCCCCGAG GTCTGTGCGG GAATCAGCTC TGCAGTTGTG 000080
000081 TCCAGGGGCA GCCGTAGACC ACACACGGCA GGCTCACAGC TCTGTTCCAT GAGAACTTTA TACACAAAAG CAGACGGGCT 000160 000161 GGCTTGGCCT CTGGATCATA ATCTGCTGAC CCCTGGGTAA GAAATTTTAA ATATTTACTT AATTCTGTTC AACAGAAGGG 000240 000241 GTGATATACT GAGGAGTGAA TAATGGGAAA GACCTGGTTC AGCTGTATCA GGAAGGACTG GTGTAAATTC AACTTATTAA 000320 000321 CTGAATTCAC AGTATTCGTG TTTTATGCCT TTAGGGGTTA AAAATGGGTC ACACACGAGC AGCATGCACT TCACTGGCGT 000400 000401 GGCAGGGCAC CTCAGTGTTT ACATGTGTGG TTCCCATGCT TACCAGGGCT GGAGGCCCGT TAGTAGTGAA GTGCATGTGG 000480 000481 AGTTCTGGAT ACTTTTCCTG GCTTTCTCTA TTTGTGTGAG CTTGTGCAGT TAGAGGTTTG GGCTGAATTT GGGTAGAAAT 000560 000561 GGGTGGCTCA CAGGCTGCAA AAGTTCTGTG GACACTTTTT CCCCCAGCTG ATTAATGTTG TAAATATTAG AATATTGTTA 000640 000641 CATAAAAGTC TGGATTTTTA CTTTCTTTCA CATTGGAATA GCTGCCAACA TTGGGCCTGC ATTCATCTCT CTAGGGCAAC 000720 000721 GTTGGCTGCA GCGGAGATGG CTGCTCCCCG GTGGGGTGTG TGCTCAGCCC GCAGCCCCCG CCCTCCGGAC TCCGTTCGCC 000800 000801 TCTGCTCTCA GCTTTGCACC TCGTCATTGT CTTCTAATTG TGCATCCCTG GACTGCGTGA CCTACAAGGC TCTCAGCACA 000880 000881 ACAAGACTCT ATGATTCTGT CTATTGGAAC AAAAAGCCAG TGAGGCAAGT GTATCATCCT GTTGATGAAT TCACAGAATT 000960 000961 AACTCTGGGA GTTGGGGACA GTTTGTATTC TTCTTCCAGA CACTCTCTGT TTCTGCTGGA TGGAAAGGTT CTGCTACTTG 001040 001041 TCCTGTGGTC AGGCCCAGCT GATGGAATGG AATGGAAGTG ACTCAGCCCC TTACTGGCAG AAACTTTAAA AGCCGCACAA 001120 001121 CATTCCTGCA CCCTCCCCTC TGCCATGAGC CTGGCAGTGC TCAGGATGGG AAAATTATTT CACCTGGGCC TGAGGATACA 001200 001201 GGAGCTACTC CCAGCGTGCA GTGGAAGAGA AGCATGGGCA AGTAATTAAA CTTTGTGTTT TCAAGCCACA GAGGTTTTTT 001280 001281 GAGGTTGTTT GCTACCATGC TTTGTCCCTA CAAACACAGT CATGGAGAAG GCCAGTGGCA GAGCCTGAGC CGTTCGTGCA 001360 001361 TCTGTTCACC AGCATCCAGA ATAACAATAG ATTTTTGAAA CATTCCTGAG AAAATTCTGG GAGTTGCATA CCGGCCAGTC 001440 001441 TTATTCCCTA AAGTTGTTCC TTCTAAAGGG TGGGATGACC AAAAATTTCA GAAAAGCAAA CCACCGCTGA AAGGCAA |
Predicted Small Protein
Name | ENST00000602608.1_smProtein_344:532 |
Length | 63 |
Molecular weight | 6787.7806 |
Aromaticity | 0.129032258065 |
Instability index | 44.3016129032 |
Isoelectric point | 6.94415283203 |
Runs | 13 |
Runs residual | 0.0560368663594 |
Runs probability | 0.0348606525077 |
Amino acid sequence | MPLGVKNGSHTSSMHFTGVAGHLSVYMCGSHAYQGWRPVSSEVHVEFWILFLAFSICVSL CS |
Secondary structure | LLLLEELLLLLLLLEEEELLLEEEEEEELLLLLLLLEEELLLEEHHHHHHHHHHEEEEEE LL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH HL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTT To |