ENST00000602608.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000602608.1

Source

Gencode19

Same with

NONHSAT124586

Classification

intergenic

Length

1517 nt

Genomic location

chr8-:326243..327759

Exon number

1

Exons

326243..327759

Genome context

Sequence
000001 TGCTCAGTGG GGATGATGGA GGGAAGGCGC CTCCCTCTGC GGGCCCCGAG GTCTGTGCGG GAATCAGCTC TGCAGTTGTG 000080
000081 TCCAGGGGCA GCCGTAGACC ACACACGGCA GGCTCACAGC TCTGTTCCAT GAGAACTTTA TACACAAAAG CAGACGGGCT 000160
000161 GGCTTGGCCT CTGGATCATA ATCTGCTGAC CCCTGGGTAA GAAATTTTAA ATATTTACTT AATTCTGTTC AACAGAAGGG 000240
000241 GTGATATACT GAGGAGTGAA TAATGGGAAA GACCTGGTTC AGCTGTATCA GGAAGGACTG GTGTAAATTC AACTTATTAA 000320
000321 CTGAATTCAC AGTATTCGTG TTTTATGCCT TTAGGGGTTA AAAATGGGTC ACACACGAGC AGCATGCACT TCACTGGCGT 000400
000401 GGCAGGGCAC CTCAGTGTTT ACATGTGTGG TTCCCATGCT TACCAGGGCT GGAGGCCCGT TAGTAGTGAA GTGCATGTGG 000480
000481 AGTTCTGGAT ACTTTTCCTG GCTTTCTCTA TTTGTGTGAG CTTGTGCAGT TAGAGGTTTG GGCTGAATTT GGGTAGAAAT 000560
000561 GGGTGGCTCA CAGGCTGCAA AAGTTCTGTG GACACTTTTT CCCCCAGCTG ATTAATGTTG TAAATATTAG AATATTGTTA 000640
000641 CATAAAAGTC TGGATTTTTA CTTTCTTTCA CATTGGAATA GCTGCCAACA TTGGGCCTGC ATTCATCTCT CTAGGGCAAC 000720
000721 GTTGGCTGCA GCGGAGATGG CTGCTCCCCG GTGGGGTGTG TGCTCAGCCC GCAGCCCCCG CCCTCCGGAC TCCGTTCGCC 000800
000801 TCTGCTCTCA GCTTTGCACC TCGTCATTGT CTTCTAATTG TGCATCCCTG GACTGCGTGA CCTACAAGGC TCTCAGCACA 000880
000881 ACAAGACTCT ATGATTCTGT CTATTGGAAC AAAAAGCCAG TGAGGCAAGT GTATCATCCT GTTGATGAAT TCACAGAATT 000960
000961 AACTCTGGGA GTTGGGGACA GTTTGTATTC TTCTTCCAGA CACTCTCTGT TTCTGCTGGA TGGAAAGGTT CTGCTACTTG 001040
001041 TCCTGTGGTC AGGCCCAGCT GATGGAATGG AATGGAAGTG ACTCAGCCCC TTACTGGCAG AAACTTTAAA AGCCGCACAA 001120
001121 CATTCCTGCA CCCTCCCCTC TGCCATGAGC CTGGCAGTGC TCAGGATGGG AAAATTATTT CACCTGGGCC TGAGGATACA 001200
001201 GGAGCTACTC CCAGCGTGCA GTGGAAGAGA AGCATGGGCA AGTAATTAAA CTTTGTGTTT TCAAGCCACA GAGGTTTTTT 001280
001281 GAGGTTGTTT GCTACCATGC TTTGTCCCTA CAAACACAGT CATGGAGAAG GCCAGTGGCA GAGCCTGAGC CGTTCGTGCA 001360
001361 TCTGTTCACC AGCATCCAGA ATAACAATAG ATTTTTGAAA CATTCCTGAG AAAATTCTGG GAGTTGCATA CCGGCCAGTC 001440
001441 TTATTCCCTA AAGTTGTTCC TTCTAAAGGG TGGGATGACC AAAAATTTCA GAAAAGCAAA CCACCGCTGA AAGGCAA
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Predicted Small Protein

Name ENST00000602608.1_smProtein_344:532
Length 63
Molecular weight 6787.7806
Aromaticity 0.129032258065
Instability index 44.3016129032
Isoelectric point 6.94415283203
Runs 13
Runs residual 0.0560368663594
Runs probability 0.0348606525077
Amino acid sequence MPLGVKNGSHTSSMHFTGVAGHLSVYMCGSHAYQGWRPVSSEVHVEFWILFLAFSICVSL
CS
Secondary structure LLLLEELLLLLLLLEEEELLLEEEEEEELLLLLLLLEEELLLEEHHHHHHHHHHEEEEEE
LL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH
HL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTT
To