ENST00000602546.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000602546.1 |
Source |
Gencode19 |
Same with |
NONHSAT137574 |
Classification |
intergenic |
Length |
762 nt |
Genomic location |
chrX+:73164181..73219203 |
Exon number |
5 |
Exons |
73164181..73164249,73164419..73164497,73214675..73214796,73218603..73218679,73218789..73219203 |
Genome context |
|
Sequence |
000001 GACTTAAGAT GGCGGCGTTT GCACGGAGTG CAATCACTGC GTCCTTACGG GGGTTGCAAG GCGTCCGAAT CTCTTCAAAA 000080
000081 TATCGGAGAA TAATTTCTTT CTCGCTGATC GCCTAACTTC TACTGACGAA GCTTGGAAGT TGCAGAAGAT GGAGTTCGCT 000160 000161 CTTGTTGCCC AGGCTGGAAT GCAATGGCAT GACCTTGGCT CACTGCAACC TCTGCCTCCC CAGTTCAAGT GGTTCTCCTG 000240 000241 CCTCAGCCTC CCGAGTAGCT GAGATTACAG GTACTGGCTC CTGTATCACC CAGCTCTGGA GTTGAAAGAG CTCTTCATTC 000320 000321 CTGAGTCTCC TGTACCACTG AGAATAGGCT GGAGTGCAGT GGCGCAATCT CGGCTCTCTG CAACCTTCAC CTCCCGTGTT 000400 000401 CAAGTGATTC TCCTGCCTCA GCCTCCTGAA TACCTGAGAT TACAAGCATG CACCACCACG CCCGTCTAAT TTTGTATTTT 000480 000481 CACTAGAGAC GGGGTTTCTC CATGTTGGTC AGGCTGGTCT CGAACTCCCG ACCTCAGGTG ATCCGCCCGC CTCAGCCTCC 000560 000561 CAAAGTGCTG GGATTACAGG CATGAGCCAC CGCGTCCAGC AAGAATAGGT GATTTTCAAA CTTGGAAACA TTCAGAAGTT 000640 000641 ATCGCCTCAG TTTCAGATTG AGTAGTCTCA AAGAGATTAC AGACATCTAC CACAAATTCT CTACTTGGTG TGGTGCAAAA 000720 000721 TCAGTATGAT GTAAACTTTG TCTCTCAGTT TCTTCAAAGG AA |
Predicted Small Protein
Name | ENST00000602546.1_smProtein_188:304 |
Length | 39 |
Molecular weight | 3838.3272 |
Aromaticity | 0.0263157894737 |
Instability index | 64.9789473684 |
Isoelectric point | 6.49102783203 |
Runs | 8 |
Runs residual | 0.0379155124654 |
Runs probability | 0.039182564918 |
Amino acid sequence | MTLAHCNLCLPSSSGSPASASRVAEITGTGSCITQLWS |
Secondary structure | LLEEELLLLLLLLLLLLLLHHHHHEELLLLLEEEEEEL |
PRMN | - |
PiMo | - |