ENST00000602546.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000602546.1

Source

Gencode19

Same with

NONHSAT137574

Classification

intergenic

Length

762 nt

Genomic location

chrX+:73164181..73219203

Exon number

5

Exons

73164181..73164249,73164419..73164497,73214675..73214796,73218603..73218679,73218789..73219203

Genome context

Sequence
000001 GACTTAAGAT GGCGGCGTTT GCACGGAGTG CAATCACTGC GTCCTTACGG GGGTTGCAAG GCGTCCGAAT CTCTTCAAAA 000080
000081 TATCGGAGAA TAATTTCTTT CTCGCTGATC GCCTAACTTC TACTGACGAA GCTTGGAAGT TGCAGAAGAT GGAGTTCGCT 000160
000161 CTTGTTGCCC AGGCTGGAAT GCAATGGCAT GACCTTGGCT CACTGCAACC TCTGCCTCCC CAGTTCAAGT GGTTCTCCTG 000240
000241 CCTCAGCCTC CCGAGTAGCT GAGATTACAG GTACTGGCTC CTGTATCACC CAGCTCTGGA GTTGAAAGAG CTCTTCATTC 000320
000321 CTGAGTCTCC TGTACCACTG AGAATAGGCT GGAGTGCAGT GGCGCAATCT CGGCTCTCTG CAACCTTCAC CTCCCGTGTT 000400
000401 CAAGTGATTC TCCTGCCTCA GCCTCCTGAA TACCTGAGAT TACAAGCATG CACCACCACG CCCGTCTAAT TTTGTATTTT 000480
000481 CACTAGAGAC GGGGTTTCTC CATGTTGGTC AGGCTGGTCT CGAACTCCCG ACCTCAGGTG ATCCGCCCGC CTCAGCCTCC 000560
000561 CAAAGTGCTG GGATTACAGG CATGAGCCAC CGCGTCCAGC AAGAATAGGT GATTTTCAAA CTTGGAAACA TTCAGAAGTT 000640
000641 ATCGCCTCAG TTTCAGATTG AGTAGTCTCA AAGAGATTAC AGACATCTAC CACAAATTCT CTACTTGGTG TGGTGCAAAA 000720
000721 TCAGTATGAT GTAAACTTTG TCTCTCAGTT TCTTCAAAGG AA
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Predicted Small Protein

Name ENST00000602546.1_smProtein_188:304
Length 39
Molecular weight 3838.3272
Aromaticity 0.0263157894737
Instability index 64.9789473684
Isoelectric point 6.49102783203
Runs 8
Runs residual 0.0379155124654
Runs probability 0.039182564918
Amino acid sequence MTLAHCNLCLPSSSGSPASASRVAEITGTGSCITQLWS
Secondary structure LLEEELLLLLLLLLLLLLLHHHHHEELLLLLEEEEEEL
PRMN -
PiMo -