ENST00000602319.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000602319.1

Source

Gencode19

Same with

NONHSAT108632

Classification

intergenic

Length

3342 nt

Genomic location

chr6-:30268551..30271892

Exon number

1

Exons

30268551..30271892

Genome context

Sequence
000001 GCCATGGCTC CTGAAAGAAA TAAAAGATGA TCATCTTTCT AAAAAGTCTT AAGTCTGAAT TATTAGTAAC TTAACTGGAG 000080
000081 AATCTCACTT TTCCTACTCT CGTATTTTAA CCACAGTTGC TCTAACACAG ACCTTTGAGG ATCTTTTCAT GACTTCATTC 000160
000161 ACAAATACCT ATTTATGCTG TACAGATGCT ACTAGGAAGG AAATAGGGAT GTCTGTTTTG ACTGTGGAAC TTAACTTGGT 000240
000241 CTCGTCTCTT CGTGCATGCA ACCCTGTCCT TGGGATAGCT TTCTTGAGCA TATCTACTTA TGTTCAAGAG GTAAATTGTC 000320
000321 CTGAAACCCC CATTGCTATA AGTATTTATT TTATTACTCA TAATACTTAA TGCTCCTAAA GTTGGGGTAT TTTTTTTTTT 000400
000401 GGATACCTAA ACTTCATTGA GATACTTTGA ACTATTTATA GAGAAAACGG AACCTTCTAA TACCTGGCTT CTATTTCTTA 000480
000481 AAATGTTATG ATCATACATG GCTTAGGGCT TTATGGCCAA ATAACTTCAC TGAACCCAGG AAAAAGAATA GATCCATCTG 000560
000561 AAACAGACCT GTAGCTTCCA GAGGCCTAAA TTTTCGGCTC CATTTGTATC CTTCATTTTC TGTGAGGTAA AGAAGTGGAA 000640
000641 GGAGACAAGC CTCAGCCCTT CCCCTGGCAC CTTTACTCTT CGCCCTTCCT CCTGGCATGG TGGAAAGTGC ACTGGAGGAG 000720
000721 GAGTGAAGGG CCCTAGGTTT GCATCCATAT TCTGCCACTT GCCAACCTTA ATGGCCCTTA CAATTGATTT ACCCTCATGA 000800
000801 AATTTGGAAT GATTTCTAAA GTCTTTCCTC GCCCTGAATG TTAACATTTT TTGATAGTCA GGACTTTCTG TAGCTTCACC 000880
000881 TTCCTTATTT AGTGTTATTT TTTTCTCAAG ACTGAACAGA GAGGGAAGCT GTCAAAGTGT GCTGGGCACA CACCCTGCAG 000960
000961 TGGGGCAATG GCCAATTCTA ATCTCAAGTC ATTAGGCTGC AGTAGCATGA CCACTGCTTC CTGTCTACCC TCAGAGGGTA 001040
001041 GAGACAGCTG AGCTCCTGTA GTTGGGGTCA GGCCCAGCCA CTCTGTGGGG ACAGTGATTA GTGTTGTGTC ACCAATTCAG 001120
001121 GGAAGGAGCC ACCTTGTCTT ATTTTCCCTC TTGAATTATC TTGATATGAC CCCATTATAA ATTTCCTTTT GTAAACCTCT 001200
001201 GTCTCCCAAT TTCTCCTTTT AGCTTACTTT CTATTGAAGT AGAGGAACAG AGTACAACTT CCATCCTCTT TCATCAGCCC 001280
001281 TGAGAGCAGA ACGCAAGCGC CGTTACTGGG AACTATATCC TTGGCTCCCT GGATGTGGCT ATTAACTTCT GGCCTGCCAC 001360
001361 TCTATCACAT ACACATATGG AGATGGTGTC ATCCATGTAC CTTACCCCGT ATTTACAACT TCTATCACCC AACAGTGCCA 001440
001441 ATGGCCCTGA TGGTCCCTCT GGGAGGGAGA GAAGAGTAAG CTGGAGTCAC CCCTTCCCTG TACTTCCCAC CTCGCCAGGC 001520
001521 CTGTTGGTGT TAGTGTCCCT TCTGATCTTG GCCTGACCCC TGTGCCCTGG GCACTGGGCT GCAGGTTGGA GAGGCAGCAT 001600
001601 GATGGAGTGG GGATAACACA TACTCCAAAA CCAAACAGAA GCCAGACCTG GGTTGGGTCC TGGCGAAACA GTCTAGAGGC 001680
001681 TTGGTGACCT TAACCTCCTA ATTAATCTTC CTAAGCATAA GTTTCCTTAT CATAAGTTAT GTATGATAAA ATTTTCCTTG 001760
001761 GATGCATTCA TTTTAGCATG ACTTGAAATT ATGTGTGAAG GAACCTGGCC CACGGAAGTT GCCCTGTAAA TTCAGATTCA 001840
001841 CTTTCCCTTG GACATATGGA TGACATTAGC TCATTACAGT TATGACCTCC CTAAAACTCC CAAATATTCT TTAAGTTCTT 001920
001921 CTCTTATTTT CCCTTTAGTT TGTAGTCATA TTTCTTAGTT CTTATATCAG TTGGGATTCC CACATCTTCT AGTTGGACAA 002000
002001 TATTGGAGAA GACACCACAT TTTAACTGAG TTCCAGTGAT ATGACAGGCT TTCAATTCTC TAATCTCACA GAAGTTAGAA 002080
002081 AAAAAGTAGA TAATCAAAAT CCACAGAAAA TATAGAAGAT TCCATTAACT CTGAGAATGA TTCTCAGGTA TCCTTAGGAC 002160
002161 CTCAAGAAAG CTGTTCTCTC CTGGGCCTGT AGAGAGTTCA AGTGCCAGGA ATCTACCACA AAGTAGCCGG GAGGTGCAGG 002240
002241 GCAGCAGGGG GCACAGTGAA GTGCTGAAGG GCTTCTCAGT CTTCTTTAAT TAGAGTGAGA AGAAAAGAGC ACCTCCTCAT 002320
002321 TTTAGAGTAC ATGGTGTGAA CTCACTCTCA GCTGCCAAGT GAGCTTCACC TTGGGCTGTT TTGCATGCTT TCTCCTAGTG 002400
002401 CTTTAAGCCA CCCTGAGATG TACAGACCAA TACTGGCCAT CACAAAAATA TACTCGAGTA CATAGACCAT TGACACTATA 002480
002481 AAGCAAGTAA ACAATGAAGT CTACATAACA GCCAAATAAC AACATGATGA TAGGATCAAA TCTGCACATA TCAATATTAA 002560
002561 CCTTGAATGT AAATGAGCTA AATGCCTCAA TTAATAGGCA GAGAGTGGCA AGTTGGACAG AGAAGCAAGA CCCAACTGTA 002640
002641 TGTCTTCAAG AGACCCATCT CATATGCAGG GACACCAATA GCCTCAAAGT AAGGGATGGA GAAAGATCTA TCAAGCAAAT 002720
002721 GGAAAACAAA AAACAGCACT CTCTGTCCAA CAAAAACAGA ATATACATTC TTTTCAGCTG CACATGGTAC ATACTCTTAA 002800
002801 AATCGACCAC AATTGCTTTA TTGGCCAGAA AGCAATTCTC AACAAATTCA AGAAACCTGA AATACCGGCC AGGTGTAGTG 002880
002881 GCTCACACCT GTAATCCCAA CACTTTGGAA GGCTGAGGTG GGCAAATCAC TTGAGGTCAA GAGTTTGAGA CCAGCCTGGC 002960
002961 CAACATGGCA AAAACCCATC TCTTCTAAAA AATATAAAAA TTAGCCGTGC ATGGTGGCAT GCGCCTGTAA TCCCAGCTAC 003040
003041 TTCGGAGGTT GAGTCACGAG AATTGCTTGA ACCTGGGAGG AGGAGGTTGC AGTGAGCTGA GATCACGCCA TTGCACTCCA 003120
003121 GTCTGGTTGA CAGAGTGAGA CTCATCTCAA AAAAACAAAA AAACCCTGAA ATACCAACCA CACTCTTGGA CCACAGTGCC 003200
003201 ATAAAAATAA ATACCAAGAA GATCTCTCAA AACCATATAA TTAAGTGGAA ATTAATCTAC TCCTGAATGA CTTGGGTAAA 003280
003281 CAAAGAGAAA TTAAGGCAGA AATCAAGAAA TTGTTTACAA CTAATGAAAA CAAAGATAAA AA
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Predicted Small Protein

Name ENST00000602319.1_smProtein_1376:1555
Length 60
Molecular weight 6393.4119
Aromaticity 0.0677966101695
Instability index 62.5101694915
Isoelectric point 6.51519775391
Runs 10
Runs residual 0.0250349867828
Runs probability 0.053939233351
Amino acid sequence MEMVSSMYLTPYLQLLSPNSANGPDGPSGRERRVSWSHPFPVLPTSPGLLVLVSLLILA
Secondary structure LEEEEEEELLHHHHHLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLHHHHHHHHHEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH
PiMo i??????????????????????????????????????????????????????????