ENST00000601420.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000601420.1 |
Source |
Gencode19 |
Same with |
NONHSAT061255 |
Classification |
intronic(S) |
Length |
533 nt |
Genomic location |
chr19-:12640582..12643787 |
Exon number |
2 |
Exons |
12640582..12641050,12643724..12643787 |
Genome context |
|
Sequence |
000001 GATTTTCTGC CTGTTGGATC TCTTAATTAC TGCTGGAGGG GTGCTGCAGT CTCCAACTAT ACAAAGGAAT ATTTTCTTTC 000080
000081 AACCAACTTG ATCTGTCTAC GTCTGATGGC CTGGAATCCT TCAGGAAAGT GTGGTCAGCT GGATTTTGTC AGAACGTGGA 000160 000161 TTTCTACGGG CCTTCTGGCC TCTCATGTTT GATGAAGGGA ACAGAAGAAA ATGGTTTCAC TTCTTCAGTG TATATTTATT 000240 000241 TATTCATGGA TACCTTTTTC AGTTTTTATC CTGTGTTTCT TTTTTTCTTT CTTTCTTTCT TTTTTTTTTT TTTTTTGAGA 000320 000321 CAGAGTTTTG CTCTTGTCAC CCAGGCTGGA GTGCAGTGGC ACAATCTCTA CTCACTGCAA CGTCCGCCTC CTGGTCTCAA 000400 000401 GCGATTCTCC TTCCTCAGCC TCCCAAGTAG CTGGTATTAC AGGTGCCCAC CACCACGCCC AGTGAATTTT TTGTATTTTT 000480 000481 AGTAGAGACA GGGTTTTGCC ATGTTGGGCT GGCTGGTCTC AAACTCCTGA TCT |
Predicted Small Protein
Name | ENST00000601420.1_smProtein_191:481 |
Length | 97 |
Molecular weight | 11617.3434 |
Aromaticity | 0.302083333333 |
Instability index | 56.5938541667 |
Isoelectric point | 9.51531982422 |
Runs | 12 |
Runs residual | 0.009235395189 |
Runs probability | 0.0562474238944 |
Amino acid sequence | MKGTEENGFTSSVYIYLFMDTFFSFYPVFLFFFLSFFFFFFLRQSFALVTQAGVQWHNLY SLQRPPPGLKRFSFLSLPSSWYYRCPPPRPVNFLYF |
Secondary structure | LLLLLLLLLEEEEEEEEEELLLEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLLLLLLLLLEEEEEELLLLEEEELLLLLLEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiii iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii |