ENST00000599673.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000599673.1 |
Source |
Gencode19 |
Same with |
NONHSAT071392 |
Classification |
intergenic |
Length |
665 nt |
Genomic location |
chr2-:70223864..70314138 |
Exon number |
6 |
Exons |
70223864..70224020,70245147..70245263,70278335..70278437,70310639..70310819,70312679..70312756,70314110..70314138 |
Genome context |
|
Sequence |
000001 GGGGCGGCGA GGCGAGGCCT GCGGAGCGGA GGAAGACAAA CATAAAGATG AAGTGCTTAA TTCAAGGTCA CACAATGTCG 000080
000081 GGGATGGACC TCCAGATTTC CTTACTGACC TGCATTATCT TGTGGATACC TGAGTGAATT CCACACCACC CATTTTATAG 000160 000161 ATGAAACCAC TGAGACATGG AGCAATTGAC TGAGTAGTCA CTGCCCCACC CCTGCCTGGA GCCTCACACA TGACTCGCCT 000240 000241 CCTCTCAGTG ACCACAGGTT GGTTGAGGGG TTTAACAAGG CTAAGAAGGT GAGACGTGGT CTTGTAACAC AGTGGTTAAG 000320 000321 AATGTGACTT TGGAGCCAGC CTGCTAGGGG CTGAATTCTG ACTCAGCCAT TTACTAACTG TGTGACCTTA GGTGGAGTCT 000400 000401 CACTCTGTAG CCCAAGCTGG AGTGGCGTGA TCTCGACTCA CTGCAACCTC CGCCTCCTGG GATCAAGTGA TTCTCGTGCC 000480 000481 TCAGCCTCCT GAGTAGCCGG GACTACAGGT CACAGAATTT TCCACACTCC TTGACAGAGG TGCTTAACCC TTATCCATCA 000560 000561 GCATTCTCAG ACAGCACCTC CGGTTAGGGA CAGTATCTGA CCGTCCGACA TCCCTGCAGC CCCCATGTGT CACACAGACT 000640 000641 CAGCCTCAGG TAGATGGTTT CCGTA |
Predicted Small Protein
Name | ENST00000599673.1_smProtein_47:136 |
Length | 30 |
Molecular weight | 3289.0266 |
Aromaticity | 0.0344827586207 |
Instability index | 59.8965517241 |
Isoelectric point | 5.48760986328 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.0212329977036 |
Amino acid sequence | MKCLIQGHTMSGMDLQISLLTCIILWIPE |
Secondary structure | LEEEELLLLLLHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |