ENST00000598613.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000598613.1 |
Source |
Gencode19 |
Same with |
NONHSAT014148 |
Classification |
antisense |
Length |
871 nt |
Genomic location |
chr10+:78698866..78737562 |
Exon number |
2 |
Exons |
78698866..78699541,78737368..78737562 |
Genome context |
|
Sequence |
000001 TTCTTTTTTT TTTTTTTTTT TTTTTTTTTT TGAGATGGAG TCTTGCTCTG TCGCCCAGGC TGGAGTGCAG TGGCATGATT 000080
000081 TTGGCTCAAT GCAAGCTCCG CCTCCTGGGT TCAAATGATT CTCCTGCCTT AGCCTCCCAA GTAGCTGGGA CTACAGGGGC 000160 000161 GTGCCACCAG GCCTTGCTAA TTTTTTGTAT TTTTAGTACA GACGGGGTTT CACTGTGTTA GCCAGGATGG TCTCGATCTC 000240 000241 CTGACCTTGT GATCCACCTG CCTTGGCCTC CCAGAGTGCT GGGATTACAG GCGTAAGCCA CCGTGCCTGG CCGATGCCAC 000320 000321 CTCTTCTTGA AAGCCTTCTC AATTCCTCAA AATACCTAAA CCAAGGATCC CTTTGTGTTC CTCTATTTCT AGCCTCGTCC 000400 000401 TTGTTTCCTT GGACTGTCAT TGTTTATGGG GATACCTCCT CCACTCACCT GAATCCTGCA AGCATAGTGA GTGGCTGAAT 000480 000481 CCAAGCAACC TTTGGTCACC TTTGTGTTCT GGGCCTTTAG AGTGCCTGAT GCATGGAGAA CAGCCATTTA TTCCTTTTTC 000560 000561 TTTTCCTTAG GAGTTACCTT TCATGGAAGG GTAAGCAGGA AGCAACTACA AGATCATCAT TTCAAAACAA TATGAAAGCA 000640 000641 GAATGGGAAA TGCCATGGCA TGCTCCCTCT TTTCAGTCTC CACAAAGAAC AATGTTCTTC CCAACCTGCC AAGACAGCCA 000720 000721 AATAACAAAA GAAATACCCG TGGAGCCCAC CTGAAGTGCA CAGATCTGGG GACATTGGGA GGAACAGAGG TAGCTTAGTG 000800 000801 ACTCTACTGT CCCTACCACC CAACCTGCTA TTAGCCCTGC TGGTCCGCTC GTGTTTGAGG TCATGAGTCA G |
Predicted Small Protein
Name | ENST00000598613.1_smProtein_74:220 |
Length | 49 |
Molecular weight | 4939.7744 |
Aromaticity | 0.0416666666667 |
Instability index | 44.7375 |
Isoelectric point | 6.48516845703 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0384894698621 |
Amino acid sequence | MILAQCKLRLLGSNDSPALASQVAGTTGACHQALLIFCIFSTDGVSLC |
Secondary structure | LHHHHHHHHHHLLLLLHHHHHHHHLLLHHHHHHHHHHHHLLLLLLELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooo |