ENST00000597931.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000597931.1 |
Source |
Gencode19 |
Same with |
NONHSAT006070 |
Classification |
intergenic |
Length |
810 nt |
Genomic location |
chr1+:147635156..147647162 |
Exon number |
3 |
Exons |
147635156..147635271,147636036..147636094,147646528..147647162 |
Genome context |
|
Sequence |
000001 CAAAAGGCCC ACTAGGTGGA GTGAAATGGA TCAGGAGCAA TTATGTTCAA TTTCACCTTT AAGTTTTCTC AAAAGGAGGA 000080
000081 GCATTAAGAA TCAGCCACCT TAGTACATAC TTAAAGGCTA GCACACATGA TTTTTTCTGC TTGCACTTCA GGAGAAGATA 000160 000161 GTCATTGGAC AAAAGTCCAC AGGTCGAGAG GAACCATACT TGAAGAAACA TACCTGAAGG GTTTCATCCA TATGTGGGCC 000240 000241 TGATTTGGAT GATAAAATCC TGCATCTTGA GCCTGATCTT GATGCTGCCT GTGTTCTGAT GCCATCAGGA GTTGAGAGTC 000320 000321 TAGGGGTTTT AGAAAGGGTG AATGTATTTT CCCATAGGCA AGGAACATAA TCAATGGCCA AAATGTGCAC TGTGACAGAT 000400 000401 TAAAGGTTGC TACAAATTCT CTGATACCCT TCCATTAAGA GGTAGGGCAG ATATTCCCTC CCCTCAAATC TGGGTGGGCT 000480 000481 CCATGACTTG CTTTGATCAA CAGAAAACGG CAGCAGTGAT GCTGGGCCAG TTGTTGGATC CAGGCCTTAA GAACCAACAA 000560 000561 CTTCCACTTA AGTTCTCTTG GAACACTGAG TCCCTGACTA CCCTAATATC ATGTTGGAAA GGCTACATGT AGGCACTCTA 000640 000641 GTTGCCAGTC CCAGCCAAGA CCAGCTTTTC AGCCATCCCC ATCACTAAAT TTGTAAATGA AGCCATCTGG AATCTCCAGA 000720 000721 CCAGCTCATT TGGCAGCTGG GTATCATCAA GTTATCTCTG CTGACTCCAC ATGGAACAAA GGAATCACCC AGCTGAGCCC 000800 000801 TATTCAAACT |
Predicted Small Protein
Name | ENST00000597931.1_smProtein_482:631 |
Length | 50 |
Molecular weight | 5580.4998 |
Aromaticity | 0.102040816327 |
Instability index | 44.1489795918 |
Isoelectric point | 7.77935791016 |
Runs | 7 |
Runs residual | 0.019194704909 |
Runs probability | 0.0285159108689 |
Amino acid sequence | MTCFDQQKTAAVMLGQLLDPGLKNQQLPLKFSWNTESLTTLISCWKGYM |
Secondary structure | LLLHHHHHHHHHHHHHHLLLLLLLLLLLLEEELLLHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |