ENST00000593957.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000593957.1

Source

Gencode19

Same with

NONHSAT062884

Classification

antisense

Length

691 nt

Genomic location

chr19-:17525066..17533133

Exon number

2

Exons

17525066..17525345,17532723..17533133

Genome context

Sequence
000001 TGGGGGGTAG GGGAGTGAGA GAGGGAAGCC AGGCAGGGGT GGGAAGGCCC AAAGATGACT CTAGGATGAG GCTCGCCAGG 000080
000081 GTGCTGTTTA AGGCAGCCAC ATGGACAACA TTGGGGATGG GGGTGGGAGG AGTGGTTAAA TCATGAATGG TATAGATGAA 000160
000161 GGAGGGGATT CCATGCAGCC TTTAGGAACC GCTGGAGTAG GCTGATCTTT GGTGATATGA AGCTGCATTC ATGGGGTGGC 000240
000241 TAGCTGTGGA ATCGGACAGA GCTGGGTGCC CATCGTGGCC CTCAAAACTT ACTTTCCATG AGCCCTCTAA TCCTATAGAG 000320
000321 GTTGGACAAC TAGCACCCAT GAGCCAAATC TGGCTCAAGG TCTGTTTTCT TTTCTTTTCT TTTTGAGACA GAGTCTCACT 000400
000401 CTGTCGCCCA GGCTGGAGAC TGAAAGGTGG TGTTGATTGA CCATGGACCC AGGGAAATAT CTGCAGTGGG TTAAGGATAC 000480
000481 TCTGTGTGTC TTACAAAACA GAGACACAGA TGCTGCCTAA GAACGAGGTC CTCCTGGAAC CGGTGCCAGG GAAGGATCTG 000560
000561 GAAGGAAAAG AAGAATACCT GTGATAGGTG TGAGAGAGGA GTGCCACTCA CTGTTCACTG CAGCAGCAGG CGACAGGTGA 000640
000641 ATTCTGAATT CTTTTTTTTT TCCTTTTGAG ACAGAGTCTT GTTCTGTAGC C
[back to top]

Predicted Small Protein

Name ENST00000593957.1_smProtein_230:385
Length 52
Molecular weight 5786.6793
Aromaticity 0.156862745098
Instability index 56.7450980392
Isoelectric point 5.50958251953
Runs 8
Runs residual 0.00262085032033
Runs probability 0.0444157392688
Amino acid sequence MGWLAVESDRAGCPSWPSKLTFHEPSNPIEVGQLAPMSQIWLKVCFLFFSF
Secondary structure LLEEEEELLLLLLLLLLLLLLLLLLLLLLEELLLLLHHHHHHHHHHHEELL
PRMN -
PiMo -