ENST00000593957.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000593957.1 |
Source |
Gencode19 |
Same with |
NONHSAT062884 |
Classification |
antisense |
Length |
691 nt |
Genomic location |
chr19-:17525066..17533133 |
Exon number |
2 |
Exons |
17525066..17525345,17532723..17533133 |
Genome context |
|
Sequence |
000001 TGGGGGGTAG GGGAGTGAGA GAGGGAAGCC AGGCAGGGGT GGGAAGGCCC AAAGATGACT CTAGGATGAG GCTCGCCAGG 000080
000081 GTGCTGTTTA AGGCAGCCAC ATGGACAACA TTGGGGATGG GGGTGGGAGG AGTGGTTAAA TCATGAATGG TATAGATGAA 000160 000161 GGAGGGGATT CCATGCAGCC TTTAGGAACC GCTGGAGTAG GCTGATCTTT GGTGATATGA AGCTGCATTC ATGGGGTGGC 000240 000241 TAGCTGTGGA ATCGGACAGA GCTGGGTGCC CATCGTGGCC CTCAAAACTT ACTTTCCATG AGCCCTCTAA TCCTATAGAG 000320 000321 GTTGGACAAC TAGCACCCAT GAGCCAAATC TGGCTCAAGG TCTGTTTTCT TTTCTTTTCT TTTTGAGACA GAGTCTCACT 000400 000401 CTGTCGCCCA GGCTGGAGAC TGAAAGGTGG TGTTGATTGA CCATGGACCC AGGGAAATAT CTGCAGTGGG TTAAGGATAC 000480 000481 TCTGTGTGTC TTACAAAACA GAGACACAGA TGCTGCCTAA GAACGAGGTC CTCCTGGAAC CGGTGCCAGG GAAGGATCTG 000560 000561 GAAGGAAAAG AAGAATACCT GTGATAGGTG TGAGAGAGGA GTGCCACTCA CTGTTCACTG CAGCAGCAGG CGACAGGTGA 000640 000641 ATTCTGAATT CTTTTTTTTT TCCTTTTGAG ACAGAGTCTT GTTCTGTAGC C |
Predicted Small Protein
Name | ENST00000593957.1_smProtein_230:385 |
Length | 52 |
Molecular weight | 5786.6793 |
Aromaticity | 0.156862745098 |
Instability index | 56.7450980392 |
Isoelectric point | 5.50958251953 |
Runs | 8 |
Runs residual | 0.00262085032033 |
Runs probability | 0.0444157392688 |
Amino acid sequence | MGWLAVESDRAGCPSWPSKLTFHEPSNPIEVGQLAPMSQIWLKVCFLFFSF |
Secondary structure | LLEEEEELLLLLLLLLLLLLLLLLLLLLLEELLLLLHHHHHHHHHHHEELL |
PRMN | - |
PiMo | - |