ENST00000593611.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000593611.1 |
Source |
Gencode19 |
Same with |
NONHSAT089230 |
Classification |
antisense |
Length |
755 nt |
Genomic location |
chr3-:42558219..42573554 |
Exon number |
7 |
Exons |
42558219..42558328,42560743..42560882,42562806..42562864,42562969..42563069,42570041..42570150,42572352..42572544,42573513..42573554 |
Genome context |
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Sequence |
000001 AAGGACTGTG CTCCCAATCC GCTTACGCTC AAGGAAGAAC TGGCAGGACC TGCAGCTAAG CAAGACGTAG GACTGCAAGC 000080
000081 TGGGTTGGCA CCCTCCCCCT AGGGAGTTCT CCAGGCCTTG CCCCCTCTGT CCCCAGCCTG GAAGCCCTCC CTGGTACCAT 000160 000161 ACCCCAGCCG ATGAGTATGT ACCCCCAGAA GTACTTCCGC TCAGAGAAGA AGGAGACGGC AAGCAGGGTG TACAGGAAGG 000240 000241 CCCAGAACCA GCCTGCTGTC AGGATCAGAA CAAAAGAGGA GGACTGCATA TGTATGGACC CACTCCAGAT GGCACGGGGA 000320 000321 CGGGGGGAGT AGGAAAAGTG GCATGGTCCC TTCCCGTGGA TATAATTCTT CCCAGGCCTG TTGTGTGAGT TGGTGATGCC 000400 000401 ATCATTCCTG CCTCACACTT GCAAACTTCC CTCTTTGGAA TTTCAGAGAC CAGGCCCACA GAGTATGGCT GTGCAAGTTG 000480 000481 TTCACTCTAC AAGGGCACCT GGCCGAGGTG AGTCCCCACT CCAGCCGGCC CCACTCACAT CACCTCTTCA ACCCAGGGGT 000560 000561 CTTACCTTGA ATGGAGGAGA AGAGCTTGAA GATGAGGGGA CAGGCCAAGA CAACTACCTG GCCCCGAGGG GTGGCTGGCC 000640 000641 AGCAGATGAG GAAATGGAGG CACAGACTGA TTAGAAAACC AGCTCAAGGT CATGTTGCTG GTAAGCGGTA CAGTCTATTC 000720 000721 CCACTCCTCT TGGTTGGAAG GCCTGTCATT TCTCT |
Predicted Small Protein
Name | ENST00000593611.1_smProtein_395:673 |
Length | 93 |
Molecular weight | 9906.8757 |
Aromaticity | 0.0434782608696 |
Instability index | 69.0195652174 |
Isoelectric point | 4.59967041016 |
Runs | 9 |
Runs residual | 0.0373787926181 |
Runs probability | 0.0432785726903 |
Amino acid sequence | MPSFLPHTCKLPSLEFQRPGPQSMAVQVVHSTRAPGRGESPLQPAPLTSPLQPRGLTLNG GEELEDEGTGQDNYLAPRGGWPADEEMEAQTD |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLEEEEEEEEELLLLLLLLLLLLLLLLLLLLLLLLEELLL LEEEELLLLLLLLLLLLLLLLLHHHHHHHLLL |
PRMN | - |
PiMo | - |