ENST00000592366.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000592366.1 |
Source |
Gencode19 |
Same with |
NONHSAT068536 |
Classification |
intergenic |
Length |
944 nt |
Genomic location |
chr2-:309023..314110 |
Exon number |
4 |
Exons |
309023..309349,310215..310393,312957..313157,313874..314110 |
Genome context |
|
Sequence |
000001 ACAGACCTTG CTCAGGTCAC GTTCTGAGCC TGCTTCTCAC TCCTGCCCCC TCCCACCCTC CTGGTTCTGC CATGGACAAG 000080
000081 CTGAAGTCTC TCTGAGACCA GGGGACCCGC ATGGCCCAGC CACCCCACCC CACCATCTCC CAGGCATGTG AGAAAATATC 000160 000161 ACATTCTCTG TGTTTTGGAG ATTTCTTCTA AATGTATTTT CCAACTATCA TTTCATAGCA AATCAGCGAG AAAAAAGAAA 000240 000241 ATAGACTCTA CTTAGAAATG AAACTCAACT AAAGGTAAAA GTTGTCAGGA ACATCTCCAA GAAAGCCAGA GTCAGCCTCT 000320 000321 AAACTTTGCA TCAAGAACGC AATGGCTTCC CTGAGGGCCC AGGGACGCGT GGCAGCTGTG AGGCAGCCCC TTCTCTGCTG 000400 000401 TCGAGGAACT GGACACTTCT CCTGTCCCTT CCCACAAGGG GCTTCCTGGA GCTCCTGCAA CCCCAGGCAT TAGTTCCGGT 000480 000481 GCAGTTCTAG GATCAGATCA ATTCACTCGA CAACAAGAGA AACAAATGGA GATTCCTACA CAAAGACTTT CAAGCACAAA 000560 000561 GAAATCCTGC TGCCTGTAAA GCGGAGCTGC CTCAGCCCTT GATGAACGAC AGAAAATCTC ACATTCCAGG AATTCAGATG 000640 000641 AAGTGAAGTG CTCTCATGGG GACCAGGCAT GGTTATGCCA GTCCACTGCC CTGCAAGCCT CAAGGGAAGC CAACTGCCCT 000720 000721 TCAGCAAGTC ACACCTGCCT TGGTGGAGGC CTTGATTGGA AGTGCCACAC GCTACATGTC CAGTCCTGAG CGGGAGAATC 000800 000801 GGTGTAGGGA CGTTCTGGGG ATGCCAGCTG TGGCCAGATC AGGTCCAACT ACAGAAGAAT AATGAAGACT CCACCTGAGG 000880 000881 GCTGGAAAAA CAAAACCTCA AGTGTGAGGC AGCCAACCTG TTACCTCGAG GGACTGTTCC GCAG |
Predicted Small Protein
Name | ENST00000592366.1_smProtein_341:472 |
Length | 44 |
Molecular weight | 4642.3184 |
Aromaticity | 0.0697674418605 |
Instability index | 55.3790697674 |
Isoelectric point | 10.4507446289 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0190400484519 |
Amino acid sequence | MASLRAQGRVAAVRQPLLCCRGTGHFSCPFPQGASWSSCNPRH |
Secondary structure | LLLHHHLLEEEEELLLLEEELLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |