ENST00000591705.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000591705.1 |
Source |
Gencode19 |
Same with |
NONHSAT146632 |
Classification |
intergenic |
Length |
4582 nt |
Genomic location |
chr17+:20448684..20453265 |
Exon number |
1 |
Exons |
20448684..20453265 |
Genome context |
|
Sequence |
000001 AGAACACGGT GGGTGCTGGG CTTCCTGGTC ATCTTGTGGA AGTGGGGTTG GGCCAGGGGA CACGGGATGG GGAGATGCTG 000080
000081 CCACCTGGGC TTGGTTAGCC CATTCGTGGG CACCAAGGGC AGCAGGAGCC TGGGCAGCTG GAGGGCAGGA GGACTCTCAG 000160 000161 GGAGGGGAGA GTCAGCTGCA CAGAGTCAGA GCCGGAGGGC GTGGCTCCAG GACACAGAGG GTGGCCACGG GGAGGATGAG 000240 000241 ATGCCCTCTG CTGATGGGGA TGAAAGGCAT TTGACTTGGG CTGTGGGGGT CAGCTGCGGA CTCCTGTGGG ACCCTCAGCA 000320 000321 GAGACGTCCT AAAGGCTCCC AACAAGCTGG CGACACAAGG ATGGTGCCTT GGCTGAAAGC CGAGATCACC TGGCCACGGT 000400 000401 GGCTGTCCCC AGATCTGGCT GCATGAGGCC CCACGGGCAG CTGTTCACCT ACCCGGCAGG GAGTGCCTCT CACTGGCCAG 000480 000481 CAGCTGCACC AGTGCCCAGA ATGCATCTTC CTCAGGCAGA TAAAGGAGAA ACAAGGTGGC AATGTGGCTC AGGTCCCTGC 000560 000561 AGTAGCCCAC CTCCTGCAAG AGCCAGAATC GCCATGGAAG GACATCACCT GGGAGGGCCG AGGTCACCTG GGAGGACTCA 000640 000641 TGTCATTGGA GAGGGCAGAG GTGACTGGGG AGGCTTCCTC TGAAGAGGCT TCCTCAGGAT GCAAATTCAT TTCATGACAA 000720 000721 GAGCCAAGTC CATCAGGCAC TTCAGCACCT TGTCCAAATT GTCTCCTGAG AGCACCGTCC TGCATGTGAC ACTGCCAAGC 000800 000801 TCCCAGGCTT TGGGGCAGCC CCAGGAGGAG GGTGTCATTT CTTGTTCTGA GAAGTGCCCA GGTGACAGGC CCAGGTGACA 000880 000881 CCAGGAGTCC AGGCCCCAAG TCCTTTGTGT CTCAGCTTGA CCCCTTGAGA CCACCCCCTT GCTTGGAGGT TTATGCCAGC 000960 000961 AGTGACCTGG AATCCTACCT CCTATATCCT GGTGGGTCAC AAATACTAAC TTTAAAAGAA GCAACGACAC CCCCATCAGA 001040 001041 CACCCACTCC TGTGAATATG GAAATATGGC CCAGGAACCT CACTGCCGGG AATACTCACC GGGTTATACT CTGAATATGC 001120 001121 CACAAGGATG TAGAATAGTT CCCGCTGCCT AGGAAACAGA GAAAGGGGGC TAGGGTTTGG TTTGTGCAGA TGCTGTTAGT 001200 001201 TTCACTTTGT CTACAAATCC TAAAAACAAA TCCCATTTCA GGTTCAGATG ATTCACCAGA TAAGCAGTGA ACTTTCAGGG 001280 001281 CCTGAGATTA TTGAAGAAAT GTTTCAGTAA AATCCACATC TGTGACATGC AAATAGCCCA GTTGTACAGG GAGTTGACCG 001360 001361 ATCCTTTTCA CTCTGAATGA TTTTTTTTTT TTTTCAGTTT GCACACACGC CAGTTCAGTC TTTGGGTGTA CAGTTCCTCC 001440 001441 ACGGTTCCAA ACCAGTGTGC AGAGTCTCCC GGCCACCACT CCAGCCCCTC CTGGAGTGAC TCCTGATCTT TCAAATCTCC 001520 001521 AGGGTTTCCC CTATGCACCC AGCCTCTCCC CGATCCGTCA GCCCCTGGCC ACCCAGACTG CTTCTCAGTC CCTATGGTTT 001600 001601 GGTCTTTTCC AGAATGGCCT AGGAATGGGA ATCCTACTGT GGTAGCTTAT TGGGTCTGGC TTCTTTCCCT TAGCAAAATG 001680 001681 CATCTAGGAT CCACCCACAT TCCTGCGGGC ATCACTGGCT CATTCCCTTT TCTCACTGGG TCTTCTGTTT GAAAGGAGGA 001760 001761 CCAGACTGTC TCTCCCCATT CCCGTGTTGA AGGCCATCCC CGAAGGCTTC GTGTGTGACT GATGAGGAAT CAAGCAGTGA 001840 001841 ACGTGGCATG CAGGTTTCAT GTGGATGTCA GTTTTCAAAT CAGTGGGTTC AATATCTGTG ACACCTTGGG GACGTGTGGT 001920 001921 TCAAGTCCAT TGAGCTTTGT GAGCCACTGC CCAACTGGCT GCCAACGTGG CTGTGCCATG TCATATTCCC AGCAGACCTG 002000 002001 GATGAGAGTT TCCAGGACCC CTAATTCTCC CAGCATTTGG TGCTGTCAGT GTTGCCTGGG GAGGCTCATG GGCTCTCCAT 002080 002081 CCTGCCACCC TCCCGTGGGT CCTACCATGG GTCCCCGTGG GTCAGGGAGA GCACCTTTCA CCATTATGCA TGATTTTGTT 002160 002161 TGCTGTCTTC TGTCTCCTCA GGATCCTCCT GGGTTCTGGC CCCACATGTT CCAGCCTGGC CCAGGGCTTG GAACCAGGGA 002240 002241 GGTGCTTGGT TCATGGTGCC GGCTGCTCCC TGGGCTAGGA GAGCTCTTGG CAGCTCTGTC ATCCCTCCTG GGTGATCCTG 002320 002321 GCTTCTGCTC TGGGAAAGTC CCCATCCCTC TCATTCACCC CATCTCCTCT GGGACCCTGT GGCTCTCGTA GGCTTACTTC 002400 002401 ACTCCATATC GATCCCTGAA GAAGACATGG TTCTGGAGAG TCCTGCTCAC GTCCAGTTTG ATCTGGTGGA TGTGTTCAGA 002480 002481 AGACCTCTTG CCCTTCTCCT TCATGATCTG TAGGGCAGGG CCAAGAGGAG GAAGCAGCCT CAGAACAGAT GGAAGACTCC 002560 002561 CTGCCCCAAA TGGCAGTCAG CCCACAGTCA GCGCTTTGGG AAGGAAGGAA AGAAGGAAGG TTTCCTTGTG CAGAAAGCTG 002640 002641 CTTTTTGGCT TGTTACTGAA GCCAGGGAGG GTCACCAGAG CCGAGTTCAT CTGTGGTGAC TATGTCACCA TCTGTGCCCA 002720 002721 GGAAGTGCAT CTGACCATCC CCCCCACCCC CCCAGGCTGG GCTTGACGTT CACTCCAGCT GGAGGCCTGG GCCCCTGACA 002800 002801 CAGCCTGTCC TGTTTGTTGT GCTCTGGCTG AGCATACCTA GTATTTTTTG GGGTGTTTTG ACTTGATTTC CTGAATGTTC 002880 002881 AGGAGGACTG ACAACACCAG GCCCCGGATG TTCATGGGAA TGCCCTTATA GATGCGATCT ATGAGCTGTG GGCAGAAAAC 002960 002961 AATCTGGTGT CACAGGCCAT GGGGTGACCC CAGTGAGGAT CAGAGCCCAG GGATTCTGGA AATTTTTGGT TTTGGCCCCA 003040 003041 TGATTCCTCA GTAGAGGTGA GATCAAGCTG GGACAGGGTC TCCCTTCCCA GGACTGAAAG AGTGGATGGA CACTCAGAGT 003120 003121 TGAAACTGTG ATCCGAACCT TTTTCTTCCT TCAGGTCACC AGGGCATCCC TAGCCTTGAG CTCCAGGTGG TCCCAGCCCT 003200 003201 AGATTCAGAT TCCCTCCCAG CAAGGTGACG CTTGCACGAA TAGGCAGGCA ATCTGACGAC CAGGCCTGCA GTCTTCTGTG 003280 003281 CAAGGACAGT GTGCCACCCG CCCTCTGAGA GGCTGACGGT GCCAGGCCAC AGCCATGGGT GCCTCTCTTC TGTCTCTGCA 003360 003361 GAGAGTACTT CCGGGGCCTC TCCCTCCACA CATTACCTTT TTGCTGTTTT TATATGACTC GCATTTGCCC AGCATTTCCA 003440 003441 GCCACTTGCT CTTTCTTTTT TTCTCCTGCC GAATTTGCTG CCAAATGAGG AATGTTGGAG TTAGCGGAGC TGCCAGGCTT 003520 003521 CCCAGAGCCG CCCGTGGATG CTGGGTCTTG GGCTCTGGAG CCCTGGTGGG ACCCAGCTGG AAGGAGCCAG GGAAGGGCAG 003600 003601 ACCCTAAGGG CTGAGAGCCT TTGAGCAAAT GAGCGCCAGT GGGCTGGCTT TGGGACCCCA GGATGTGCCA TCCTTAGGCC 003680 003681 ACAGACACAC CAGTCTTAGG TCCCAGCCTC TAGGTGGGTT CCTGACACAA GCGGGCAGCC ACCCCCAAGC CAGGACTGTG 003760 003761 GTTCTCACTT TGGAATTTTA TCAAACTGCC AAAGTTACAG CAACTGGGGT CAGGTCTCTG CTGCCCCTCC CAGTGACAGC 003840 003841 GTGTTGCCCT CACCCGCCAC CGCCCAGGCC AGCTGCTTCC TCTGCCTCAC TGACCACCCG CCCAGTCCCT ACGTCCCTGG 003920 003921 ACCAGCCCCT CCATGCATCA GGCTCTTACC TTTGCCTCCC GTGCAGTCAC AGGAGGCAGC TCCGTCTCAC TGTAAGGCAA 004000 004001 CTCAGGCAGA GCTGAGGACC TGCACAGGGC CTGGAGCCAC CCAAGCCTGG GAGCCGACCC CCAGAAAGGA CTGGCACTGT 004080 004081 CCCTATCCAG CTCAGGGCTC AGCCCAGGAG AAGTCACAGG GAAGGGAGGA CAAGGACCTT CCTGTGGGGC TGACTCCCAG 004160 004161 GAGGGGCAGG ACCTGGGAGA AGGAGTGCAG GGACAGCCTG GCTGGGGTTA CTGGGGCCCT GGCATGGGGG GTGGTCAGGC 004240 004241 TGCACAATGG GGCTGCGCGT CCTGGACTCA AGGTGGTGCT TTCTGCTGGA GCTGAGAAAG GTTAGCCCTG AGATGGGATG 004320 004321 GGGGCCACCC AGGGTGGGCG ACCGGGCCCT GACAGGAGTC CCTCAGGGAG TGACCACATC ACCCCGCCAG GGTCAAGGGA 004400 004401 GCCTGCCCTG AGACCTGCCC GGTGTACTCT GGGTGCACCA GGGGCCCATC CCACTTGACA GCCCCAAGGC TCTTGCAGGT 004480 004481 TCTGACCTCC CAGCATCCAC CTGCCTCTCC CTGCATCTGA GCCACACACC CTGCATTTCA GAAGTGGCAC GGCTCATCAG 004560 004561 CTCCCTCCCA CCCTACCTCC CC |
Predicted Small Protein
Name | ENST00000591705.1_smProtein_422:682 |
Length | 87 |
Molecular weight | 9143.2225 |
Aromaticity | 0.0697674418605 |
Instability index | 56.8790697674 |
Isoelectric point | 10.0610961914 |
Runs | 9 |
Runs residual | 0.0349704963554 |
Runs probability | 0.0404227757169 |
Amino acid sequence | MRPHGQLFTYPAGSASHWPAAAPVPRMHLPQADKGETRWQCGSGPCSSPPPARARIAMEG HHLGGPRSPGRTHVIGEGRGDWGGFL |
Secondary structure | LLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLHHHHHHHHLL LLLLLLLLLLLLEEELLLLLLLLLLL |
PRMN | - |
PiMo | - |