ENST00000591014.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000591014.1

Source

Gencode19

Same with

NONHSAT059630

Classification

intronic(AS)

Length

637 nt

Genomic location

chr18-:59967269..59968231

Exon number

2

Exons

59967269..59967840,59968167..59968231

Genome context

Sequence
000001 AGCTGTGAAT ACCCCGAGGG AAGAGACTAT GACTTGCTCA AGCTCATCTT TGTGAACAGC CCATGGCTCT TTGAAGGTGA 000080
000081 AATCCATATA TGCAACATCT TTGTATTCCC CACAACAAAA GGCAGAGCTC TTCACAGATA CAGATATCTT TATCTGCACC 000160
000161 CACTCTTGCT TTTCCTTCCA TCTTAGAAGC AGTTCCTTTC ACTGCTTCAA GTAAAATACT TTCCTCTTGT GCTTTTGATC 000240
000241 TACAATAGAC TTCAGAGGAA GGGTGGGGTC AAGGAAGGCT TCCCTGAAGA GGCAACATCT AAGCTCTGTC CTGAAGGATG 000320
000321 AGTAGGAACT AGCCAGGCAG AGTAAGAATA CTCCTGGCAG ACGGAATCAT ATGTGTAAAA ACCTGAGGAG AACAGAAGCT 000400
000401 TGCCGTGAAT CTGATTAAGT CTCTAGATCT AGACCCAGCT ACCAAATATA CAAGAAATAG AGAAGAACAT GTTAAAAGAC 000480
000481 AGAAGAGAAA TGCAATCACC AAAATTCAGA CTGTGGGAAA CTCTATAGGA CAAATGACTC AGTTTCTTCA ATAAGTAAAT 000560
000561 TGTATGGAGA AAAAAGGAAT AAAAGGGTGA CATTCTATCT ATGGATTGAA GGAGACAACA TAGCAACCAA CTACAAT
[back to top]

Predicted Small Protein

Name ENST00000591014.1_smProtein_89:247
Length 53
Molecular weight 5643.4731
Aromaticity 0.0576923076923
Instability index 93.0596153846
Isoelectric point 7.85736083984
Runs 9
Runs residual 0.0227075184702
Runs probability 0.0767434100768
Amino acid sequence MQHLCIPHNKRQSSSQIQISLSAPTLAFPSILEAVPFTASSKILSSCAFDLQ
Secondary structure LLEEELLLLLLLLLLLEEEEELLLLLLLHHHHHHLLLLLLHHHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooo