ENST00000590997.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000590997.1 |
Source |
Gencode19 |
Same with |
NONHSAT033128 |
Classification |
intronic(AS) |
Length |
768 nt |
Genomic location |
chr13+:33851690..33855419 |
Exon number |
4 |
Exons |
33851690..33851833,33852633..33852806,33853598..33853793,33855166..33855419 |
Genome context |
|
Sequence |
000001 GGAGACTCTA AGACTTCTGA AGAGTTTCTT GCTTCTTTCC TGTGGGGCAG TGACTCCACT TCCCAGCAGT AATGGAATAT 000080
000081 CCTGAATTAG CTACATTAAT GTTAGAACCA TTTGGACCTC ACCCAGGACT TCAACTACAT TATGGATGTT ATAAGAAATG 000160 000161 AGACTCACTA CTGAATTCAC AGCAGGCATG GTTGAAGGCA CCATTCACTA TAGCTTGCAG TGTTCCCTTT ATGAGATTTG 000240 000241 TATGAGAAAT TCCTCTCATA GGTCAAGTTC TTGGGAGAAA ATTCTCCCAA AGAGCAAGTC CCAGGAAAAT CTTGGCTGCT 000320 000321 AAAGTTACAG AACCCAAATT TGGCAACTGT CTGCATCTGA ACAACAGAAG TTTCAACATT CTGCCAACAG AGTAACTCCT 000400 000401 GGACGATTGG CACAGAAGAA GGCACAAGGC AAATACCCAT CTCTGTACAC CCTGTGCTAC TGTGTCATGT GCTGCTCCAG 000480 000481 GCAACTCCAA TGGATTGGCC ACCCTGGCCA ATGTGTTCTA GTATGTTACG TTTATGTTCC CCTGCTTTCT ACAATCCTGT 000560 000561 TCAAAGAGTT GCTGACTTAA CCACAGAGAG GATTCCAGAA CCTGAGACAC AGAATAAACT TGAGCAATCA TAGTCCATCC 000640 000641 ACTTCATTGT CTCATCAAAA ACCAAAGGTC CAGTGAAGCT CTGGAACTCA ACGCTGTAAA GGAGCGAAGG AGCTTCTATA 000720 000721 CAGAGCCTGG ATGCCTGTCT CCTTATCCTA CTTCAGTGGA CTTGACTG |
Predicted Small Protein
Name | ENST00000590997.1_smProtein_71:160 |
Length | 30 |
Molecular weight | 3363.9225 |
Aromaticity | 0.137931034483 |
Instability index | 55.6586206897 |
Isoelectric point | 5.98065185547 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.0182653241477 |
Amino acid sequence | MEYPELATLMLEPFGPHPGLQLHYGCYKK |
Secondary structure | LLLHHHHHHHHLLLLLLLLLLLLLLEELL |
PRMN | - |
PiMo | - |