ENST00000590622.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000590622.1

Source

Gencode19

Same with

,

Classification

intergenic

Length

1749 nt

Genomic location

chr19-:36810618..36822620

Exon number

6

Exons

36810618..36811662,36812202..36812259,36812895..36812932,36813032..36813127,36821155..36821394,36822349..36822620

Genome context

Sequence
000001 GCAGGTGGCC TCCAGGTGCA AAGTGGGAAG TGTGAGTCCT CAGTCTTGGG CTATTCGGCC ACGTGCCTGC CGGACATGGG 000080
000081 ACGCTGGAGG GTCAGCAGCG TGGAGTCCTG GCCTTTTGCG TCCACGGGTG GGAAATTGGC CATTGCCACG GCGGGAACTG 000160
000161 GGACTCAGGC TGCCCCCCGG CCGTTTCTCA TCCGTCCACC GGACTCGTGG GCGCTCGCAC TGGCGCTGAT GTAGTTTCCT 000240
000241 GACCTCTGAC CCGTATTGTC TCCAGATTAA AGGTACGACA TTTGGAGGCC CCAGCGAGAA ACGTCACCGG GAGAAACGTC 000320
000321 ACCGGGCGAG AGCCGGGCCC GCTGTGTGCT CCCCCGGAAG GACAGCCAGC TTGTAGGGGG GAGTGCCACC TGAAAAAAAA 000400
000401 ATTTCCAGGT CCCCAAAGGG TGACCGTCTT CCGGAGGACA GCGGATCGAC TACCATGTGG GTGCCCACAA AAATTCCACC 000480
000481 TCTGAGTCCT CAACTGCTGA CCCCGGGGTC AGTAGACACG GGGTTTCACC ATGTTGGCCA GGCCGGTCTT GAACTTGTGA 000560
000561 CGTCAGGTGA TGCACCCGCC TTGGCCTCCC AAAGTGCTGG GATTACAGGT CCAGATTTTG AACAAATCTC GCTAGAGATT 000640
000641 GAACAGAGCT GCGCCTGGAT CCCGCCACAG TGAGGAGACC TGAAGACCAG AGAAAACACA GCAAACGGAG TCTTGCTCTG 000720
000721 TTGTCCAGGC TGGAGTGTAG TGTGGCGATC TCGGCTCCCT GCAAGAATCT GCCTCCCAGA TTCACGCCAT TTTCCCACCT 000800
000801 CAGCCCCTGG AGTAGCTGGA AGTACAGGCT CCCGCCACCA CGCCTGGCTA ATTTTGTTTT TGTATTTTTA GTAGAGACGG 000880
000881 GGTTTCACTG TGTTAGGTAG GATGGTCTCG ATCTCCTGAC CTCATGATCC ATCCGCCTTG GCCTCTCAAA GTGCTGGGAT 000960
000961 TACAGGCATG AGCCACCGCA CCTGGCTGTT TTTTCATTTC TATTATGATT TGTTCTGTGG AATGTCAGTG ACTTAGCGGT 001040
001041 GTTTTTCACA TGTTTATAAA GCTGAATAGT TCTGTATGTC AGCTCAGCAC CCCTAGTGTC AGTCATGCTA CTCTCCTGCT 001120
001121 GTGCATAGAT GGGGGCCTGT CCACACCCAA ATCTCCTGGG TTCCCGCTGT CCGCACCTGA AGGTACCCAC CAGATGTGTC 001200
001201 TGTCACTGCC CTCCATCCAC CTTTCTTGTG GTTCTCATGT TTCTGCCTCC CTAGAGACCA TTTCTCTCTA CAGCAGTAGT 001280
001281 TTCCAATAGA AATACAATGC CAGACACATA CGTCATTTTA GATTTTCTAG TAGTCACTTT AGAAAAGTGA AAAAGAGGCC 001360
001361 AGCTGCAGTG GCTCACACCT GTAATCCCAG CACTTTGGAA GGCTGAGGTG GGTGGATCAC GAGGTCAGGA GATCGAGACC 001440
001441 ATCCTGGCCA ACATGGTGAA ACCCCCTCTC TACTAAAAAT ACAAAAAATT AGCTGGGCGT GGTGGCAGGC GCCTGTAGTC 001520
001521 CCAGCTACTC GAGAGGCTGA GGCAGGAGAA TGGCGTGAAC CCGGTAGGCA GAGCTTGCAG TGAGCCGAGA TAGCGCCACT 001600
001601 GCACTCCAGC CTGGGCGACA GAGGGAGACT CCATCTCAAA AAAAAAAAAA AGGTTACAAA GAAACAGGTG AAATTAGTTT 001680
001681 TATTTCACCT AAAATGTTAG CATTATCCAA AATATCACTT CAACATCTTA TCAAAATAAA AATTATTAA
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Predicted Small Protein

Name ENST00000590622.1_smProtein_1049:1288
Length 80
Molecular weight 8236.3878
Aromaticity 0.0506329113924
Instability index 42.6493670886
Isoelectric point 6.36480712891
Runs 15
Runs residual 0.0495925091035
Runs probability 0.0250132485426
Amino acid sequence MFIKLNSSVCQLSTPSVSHATLLLCIDGGLSTPKSPGFPLSAPEGTHQMCLSLPSIHLSC
GSHVSASLETISLYSSSFQ
Secondary structure LEEEELLLEEELLLLLLLLLEEEEEELLLLLLLLLLLLLLLLLLLLLEEEELLLLEEEEL
LLHHHHLLEEEEEEEELLL
PRMN -
PiMo -