ENST00000590622.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000590622.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1749 nt |
Genomic location |
chr19-:36810618..36822620 |
Exon number |
6 |
Exons |
36810618..36811662,36812202..36812259,36812895..36812932,36813032..36813127,36821155..36821394,36822349..36822620 |
Genome context |
|
Sequence |
000001 GCAGGTGGCC TCCAGGTGCA AAGTGGGAAG TGTGAGTCCT CAGTCTTGGG CTATTCGGCC ACGTGCCTGC CGGACATGGG 000080
000081 ACGCTGGAGG GTCAGCAGCG TGGAGTCCTG GCCTTTTGCG TCCACGGGTG GGAAATTGGC CATTGCCACG GCGGGAACTG 000160 000161 GGACTCAGGC TGCCCCCCGG CCGTTTCTCA TCCGTCCACC GGACTCGTGG GCGCTCGCAC TGGCGCTGAT GTAGTTTCCT 000240 000241 GACCTCTGAC CCGTATTGTC TCCAGATTAA AGGTACGACA TTTGGAGGCC CCAGCGAGAA ACGTCACCGG GAGAAACGTC 000320 000321 ACCGGGCGAG AGCCGGGCCC GCTGTGTGCT CCCCCGGAAG GACAGCCAGC TTGTAGGGGG GAGTGCCACC TGAAAAAAAA 000400 000401 ATTTCCAGGT CCCCAAAGGG TGACCGTCTT CCGGAGGACA GCGGATCGAC TACCATGTGG GTGCCCACAA AAATTCCACC 000480 000481 TCTGAGTCCT CAACTGCTGA CCCCGGGGTC AGTAGACACG GGGTTTCACC ATGTTGGCCA GGCCGGTCTT GAACTTGTGA 000560 000561 CGTCAGGTGA TGCACCCGCC TTGGCCTCCC AAAGTGCTGG GATTACAGGT CCAGATTTTG AACAAATCTC GCTAGAGATT 000640 000641 GAACAGAGCT GCGCCTGGAT CCCGCCACAG TGAGGAGACC TGAAGACCAG AGAAAACACA GCAAACGGAG TCTTGCTCTG 000720 000721 TTGTCCAGGC TGGAGTGTAG TGTGGCGATC TCGGCTCCCT GCAAGAATCT GCCTCCCAGA TTCACGCCAT TTTCCCACCT 000800 000801 CAGCCCCTGG AGTAGCTGGA AGTACAGGCT CCCGCCACCA CGCCTGGCTA ATTTTGTTTT TGTATTTTTA GTAGAGACGG 000880 000881 GGTTTCACTG TGTTAGGTAG GATGGTCTCG ATCTCCTGAC CTCATGATCC ATCCGCCTTG GCCTCTCAAA GTGCTGGGAT 000960 000961 TACAGGCATG AGCCACCGCA CCTGGCTGTT TTTTCATTTC TATTATGATT TGTTCTGTGG AATGTCAGTG ACTTAGCGGT 001040 001041 GTTTTTCACA TGTTTATAAA GCTGAATAGT TCTGTATGTC AGCTCAGCAC CCCTAGTGTC AGTCATGCTA CTCTCCTGCT 001120 001121 GTGCATAGAT GGGGGCCTGT CCACACCCAA ATCTCCTGGG TTCCCGCTGT CCGCACCTGA AGGTACCCAC CAGATGTGTC 001200 001201 TGTCACTGCC CTCCATCCAC CTTTCTTGTG GTTCTCATGT TTCTGCCTCC CTAGAGACCA TTTCTCTCTA CAGCAGTAGT 001280 001281 TTCCAATAGA AATACAATGC CAGACACATA CGTCATTTTA GATTTTCTAG TAGTCACTTT AGAAAAGTGA AAAAGAGGCC 001360 001361 AGCTGCAGTG GCTCACACCT GTAATCCCAG CACTTTGGAA GGCTGAGGTG GGTGGATCAC GAGGTCAGGA GATCGAGACC 001440 001441 ATCCTGGCCA ACATGGTGAA ACCCCCTCTC TACTAAAAAT ACAAAAAATT AGCTGGGCGT GGTGGCAGGC GCCTGTAGTC 001520 001521 CCAGCTACTC GAGAGGCTGA GGCAGGAGAA TGGCGTGAAC CCGGTAGGCA GAGCTTGCAG TGAGCCGAGA TAGCGCCACT 001600 001601 GCACTCCAGC CTGGGCGACA GAGGGAGACT CCATCTCAAA AAAAAAAAAA AGGTTACAAA GAAACAGGTG AAATTAGTTT 001680 001681 TATTTCACCT AAAATGTTAG CATTATCCAA AATATCACTT CAACATCTTA TCAAAATAAA AATTATTAA |
Predicted Small Protein
Name | ENST00000590622.1_smProtein_1049:1288 |
Length | 80 |
Molecular weight | 8236.3878 |
Aromaticity | 0.0506329113924 |
Instability index | 42.6493670886 |
Isoelectric point | 6.36480712891 |
Runs | 15 |
Runs residual | 0.0495925091035 |
Runs probability | 0.0250132485426 |
Amino acid sequence | MFIKLNSSVCQLSTPSVSHATLLLCIDGGLSTPKSPGFPLSAPEGTHQMCLSLPSIHLSC GSHVSASLETISLYSSSFQ |
Secondary structure | LEEEELLLEEELLLLLLLLLEEEEEELLLLLLLLLLLLLLLLLLLLLEEEELLLLEEEEL LLHHHHLLEEEEEEEELLL |
PRMN | - |
PiMo | - |