ENST00000590413.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000590413.1

Source

Gencode19

Same with

NONHSAT005113

Classification

overlapping(AS),antisense

Length

831 nt

Genomic location

chr1+:110925441..110960984

Exon number

6

Exons

110925441..110925622,110954795..110954915,110956774..110956853,110958631..110958810,110960111..110960262,110960869..110960984

Genome context

Sequence
000001 TTGCCAGCTT TATACCTGCA CAAAAACGAA GAGATGACAT GATGGATCCA ATCCAACCAA TTTGCTCTGA GGTGCCTTCA 000080
000081 AACTCTTCTT GAAAGACCAC AAAGAAAATT GCAAAAGTCT TGGTCATCCC CATCACAAAC ACATTCACCT AAATCAAAGC 000160
000161 AGACCAGAGT CCAACTCAGG TGGAAGAGTG TCTTCATCTC TGCATCCCTA GTGCAACAGA GCATGACAAA AATTCAACAA 000240
000241 ATATTTATTG AAGAGTCTTG ATGTCTTTTG GGAAAGGAAC TCTATGGTTA CCTTTACTCT AAGTTAAAAA CAACAACAAC 000320
000321 AACAACAAAA ACACAAAACC CTGAGGCTCA GAAGATAAAT ATTTGCTGAA GATCACTGTG CTTATTAGAT GGGTGTTACT 000400
000401 GATTCTTACC TCAGAGAAGA GAATGTCATG GAGACAAAAT GACCTGCTTA GAGTTCTGCA CCCCCCAGCA TGGAGAGCAG 000480
000481 AGCGCAAAGA TTTCTTCCGG ACTCCCACAT TCCCCTTGGA ATCCAAGAAC TGGTCTACTG TCACAACACT TTAGTACCCT 000560
000561 CTTAGATGGG GATCTCACTC TGTTGCCCAG GCTGGTCTCA AACTCCTGGC TTCAAGCAAT CCTCCTGCTT CGGCCTCCCA 000640
000641 AACTTCTGGG ATTACAGATA TGAGCCACCA CGGCTGGCTG ACAGGCACCA AATTCTAGGA GAGGACTTGA ATAGACTCCC 000720
000721 AAGGAGGCAG CAGAAACTGG GGTAATCACA ACGGTCAACA GCAGCAAAGG CAGCACTTTC TGATTTACTT GACTGCTATG 000800
000801 GATGCCACCT CTCTCCACGC CTCAGTTTAA T
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Predicted Small Protein

Name ENST00000590413.1_smProtein_422:553
Length 44
Molecular weight 5229.93
Aromaticity 0.139534883721
Instability index 42.9209302326
Isoelectric point 10.7805786133
Runs 7
Runs residual 0.0054873268879
Runs probability 0.0399348928761
Amino acid sequence MSWRQNDLLRVLHPPAWRAERKDFFRTPTFPLESKNWSTVTTL
Secondary structure LLLLLLHHHHHLLLLHHHHHHHHLLLLLLLLLLLLLLEEELLL
PRMN -
PiMo -