ENST00000589287.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000589287.1 |
Source |
Gencode19 |
Same with |
NONHSAT129915 |
Classification |
antisense |
Length |
910 nt |
Genomic location |
chr9-:454447..469802 |
Exon number |
4 |
Exons |
454447..454606,456201..456703,466688..466853,469722..469802 |
Genome context |
|
Sequence |
000001 GCCGCCCGGT GGCTTTGCTT CAGGCGGAAG TCCGCGTGCT TTGATACCCT CAGGGGGCAC TTACAGGCTA GGTGGACACA 000080
000081 GACACTAGTC CCACTTCTTT GGTTATCTGT ATTCTGAGTC CACAAATCAG AGGCATCCAG TTGAAAAAGC TGAAAGCTTC 000160 000161 TAGAATGGCA CTATCCAATA TGGTAGCCAG TGGCCCCCTG TGGCTACTGT GCACTTAAAA TGTGGCCAGT CCTAACTGCA 000240 000241 ACGTGCTGAA AAGACAGAAG CTGATTGAGG TCCCAGCTTG GTAACAGTTT GAAGAGTTGC AGGACTGGCT GGATGAGTAC 000320 000321 TGGCTGCAGC AAATCAGGCT GCCAGGATTC TTTATGGCTG TTTCTGCTTC CACTACAGCT GAGTCAGAAA GGTCGCTGCC 000400 000401 CCGTGGTGGC ACTAGACGCA GTGGACCTGG CAAGCAAATG TTTCCGCTAT TAGCTCTCAG CAACAGAGAC TCATTTATGG 000480 000481 TCACCTTGGA AATCTGGGCT TATCGATCTA CAGCCCAAGT CTGCTGAGAA GCTGGAGCTT ACTAAAGGGG AAACCTGAGA 000560 000561 GCTGTTCAAG CCCCAAATAT TTTCCACTTC TGCGTCACCT CTGCTGTCTG TTAGCAGAGT GGAGGAGAAA ATACACAGCA 000640 000641 CAAACAACGT GAAAAAATAG TTACTCTATT CATTAAAAGC TGTAACTTCC AGATTGGACT TGAGAAGCAA TTAAGCAACA 000720 000721 GAGGAACCTC ATCTACTATC TGTATTCAGG CATGCTCATG AGAACACGCT GCTCCAGCTG GACTTAGAGG AACCCGGTGC 000800 000801 ATCACAGGCA TTCCTGACAG AGTCTCGTGG TCCTGCTGGT CCACTCAGTG GTACTCAGTC CTCCTCATTC TCGGGGATAG 000880 000881 GTTCCAAGAC CCCCAGGGGA TGCCTGAAAC |
Predicted Small Protein
Name | ENST00000589287.1_smProtein_353:526 |
Length | 58 |
Molecular weight | 6221.0485 |
Aromaticity | 0.0701754385965 |
Instability index | 57.5438596491 |
Isoelectric point | 10.0220336914 |
Runs | 10 |
Runs residual | 0.0214912280702 |
Runs probability | 0.0253488782901 |
Amino acid sequence | MAVSASTTAESERSLPRGGTRRSGPGKQMFPLLALSNRDSFMVTLEIWAYRSTAQVC |
Secondary structure | LLEEELLLHHHLLLLLLLLLLLLLLLLLLLLLEELLLLLLEEEEEHHHHHHHHLLLL |
PRMN | - |
PiMo | - |